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SCNpilot_expt_300_bf_scaffold_10446_1

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(1..204)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Afipia birgiae RepID=UPI0002E46EB5 similarity UNIREF
DB: UNIREF100
  • Identity: 88.2
  • Coverage: 68.0
  • Bit_score: 130
  • Evalue 7.20e-28
ModE molybdate transport repressor domain-containing protein {ECO:0000313|EMBL:EKS37030.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia. similarity UNIPROT
DB: UniProtKB
  • Identity: 85.3
  • Coverage: 68.0
  • Bit_score: 126
  • Evalue 1.50e-26
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 83.8
  • Coverage: 68.0
  • Bit_score: 123
  • Evalue 2.50e-26

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 204
GTGCTGAACATCGAGATCGAAACCATCTGGCGGTTTCACAAGGAGGGTAGCCCGCAGACCGCAGTGGTGATGCTCGGAATCCTCAATGAGATCCGGCAAACCGGGAAACTCACCAGCGCGGCGGCACATGCGCGCCTGTCGTATCGGCATGTGTGGAATCTGATCGAGCAATGGTCCGACTTCTTCGGCGTGCCGCTGGTGGAA
PROTEIN sequence
Length: 68
VLNIEIETIWRFHKEGSPQTAVVMLGILNEIRQTGKLTSAAAHARLSYRHVWNLIEQWSDFFGVPLVE