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SCNpilot_expt_300_bf_scaffold_10972_1

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 1..765

Top 3 Functional Annotations

Value Algorithm Source
Fagellar hook-basal body protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2G1_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 86.2
  • Coverage: 254.0
  • Bit_score: 444
  • Evalue 8.50e-122
Flagellar hook protein FlgE {ECO:0000313|EMBL:CEG07395.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratc similarity UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 254.0
  • Bit_score: 444
  • Evalue 1.20e-121
flgE; flagellar hook protein FlgE similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 254.0
  • Bit_score: 439
  • Evalue 5.90e-121

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 765
GCGGGCACCGGCACCGTGATCGGCTCCGACCTGCAGAACTTCATCGCCCAATCGGTCTCGGGCGGTGCGACTACCGCCTACGACGTGTCGGGCTCGCCCGTCAGCCTGCAATTCCGCTGGGCGAAGGTGGACAGCGCGACGCTCGGCGCGGGCCATGTCGACAAGTGGAATCTATTCTATCAGGTCAATCCGAACGCGACCGGTTCTGACGTGGCGTGGCAGAATGTCGGTACTGATTTCACCTTCGGTGCGAACGGCCAGATGAGCCCGGCCGTTCCGTCGGTGACGCTGAACAACCCGACCATCGGCGGCGTGCCGCTCGGCAACGTGACCGTTAATTTCGGCGCCAGCGGTGTGACCCAGTTCGCCGACGCTAACGGCAACGTCCAGGTCAACGACATCCGTCAGGACGGTTTCCCGGCCGGACAATTGCAGACCGTGTCGATCAGCACCAACGGCCGCGTGGTCGGCAACTATTCGAACGGCCGCAATATCGATCTCGCCCAGATCGTGCTTGCGACGTTCAACGGTCCGAACTTCCTCAAGCGCATCGACGGCGGCGCGTTCGAGGCGACCGATGAATCGGGCGGTGCGCTGTTCGGCAAGGGCGGCAAGATCGTGGGTTCCTCCCTCGAAGGCTCGAACAGCGATATCGCCGACGAATTTACCAAGCTGATCGTCACCCAGCAGGCCTATTCGGCCAATACCAAGGTCATCACCACGGCTAACCAGATGGCGCAGGATCTGCTCAACGTGCTGCGCTGA
PROTEIN sequence
Length: 255
AGTGTVIGSDLQNFIAQSVSGGATTAYDVSGSPVSLQFRWAKVDSATLGAGHVDKWNLFYQVNPNATGSDVAWQNVGTDFTFGANGQMSPAVPSVTLNNPTIGGVPLGNVTVNFGASGVTQFADANGNVQVNDIRQDGFPAGQLQTVSISTNGRVVGNYSNGRNIDLAQIVLATFNGPNFLKRIDGGAFEATDESGGALFGKGGKIVGSSLEGSNSDIADEFTKLIVTQQAYSANTKVITTANQMAQDLLNVLR*