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SCNpilot_expt_300_bf_scaffold_9948_1

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(69..704)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Afipia birgiae RepID=UPI0002D91F7C similarity UNIREF
DB: UNIREF100
  • Identity: 91.9
  • Coverage: 211.0
  • Bit_score: 396
  • Evalue 1.70e-107
JmjC domain-containing transcription factor {ECO:0000313|EMBL:EGP06988.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiac similarity UNIPROT
DB: UniProtKB
  • Identity: 91.9
  • Coverage: 211.0
  • Bit_score: 394
  • Evalue 9.00e-107
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 211.0
  • Bit_score: 329
  • Evalue 9.30e-88

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Taxonomy

Bradyrhizobiaceae bacterium SG-6C → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 636
ATGAACGCCACCTCCGGCATTGCGCCCGTCATCACTGCCGACAATGAATCCTTGAAGCGGGATTTTCCGCTCAAGCCTTTCGCGATCCGTCACAAGCTGGCGGGCCATCCGCTGCTCACGCTGACGCGTATCGCGCAACTCGCGGCCGACATGCCGCGCGACCTGATCGAATACAATTCGGGCAATGCCGATATCAGCCAGGATCCGGACAAGGTGCAGAGCGTCGATCTAAATCCGGTCGAGGTCGTCAACCGCATCCAGACCGCGGGCGCCTGGATGGTGCTCAAGCGCATCGAGAAGTCGCCGGAATATCGCGCGCTGCTGGAAGACGCACTGACCTCGGTGGCCCGCGCGCGCGGCTTCAAGAGCATCGAGGATGCAGGCTTCTCGCAGATCGAGGGCTTCCTGTTCGTCTCGTCGCCGAATTCGACTACGCCGTTCCACATGGACGCCGAGGACAATTTCTTCGTGCAGATCTATGGCGAGAAGATTTTCGCGGTGTACGACAACCGCGACGGCCAGATCGCCGACGACGCGCAGGTGGAGCATTCCACCGTCAAGCATCGCAATGTGCCGTTCAATGAAAGCTTCCGCCCGCGCGGGATCGAGTTCAATCTCGACGCCGGCGACGGCTGA
PROTEIN sequence
Length: 212
MNATSGIAPVITADNESLKRDFPLKPFAIRHKLAGHPLLTLTRIAQLAADMPRDLIEYNSGNADISQDPDKVQSVDLNPVEVVNRIQTAGAWMVLKRIEKSPEYRALLEDALTSVARARGFKSIEDAGFSQIEGFLFVSSPNSTTPFHMDAEDNFFVQIYGEKIFAVYDNRDGQIADDAQVEHSTVKHRNVPFNESFRPRGIEFNLDAGDG*