ggKbase home page

SCNpilot_expt_300_bf_scaffold_9948_4

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 2526..2774

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P469_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 82.0
  • Bit_score: 133
  • Evalue 1.00e-28
Uncharacterized protein {ECO:0000313|EMBL:EKS36256.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717 similarity UNIPROT
DB: UniProtKB
  • Identity: 74.4
  • Coverage: 82.0
  • Bit_score: 133
  • Evalue 1.40e-28
type IV pilus assembly PilZ similarity KEGG
DB: KEGG
  • Identity: 62.2
  • Coverage: 82.0
  • Bit_score: 114
  • Evalue 1.40e-23

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 249
ATGCATCAGGAACGTCGCTTTGCCCGGATCAAACCGTCCGGAAGCCTGTCGAAGGCCGGAAAGATCATCATCGATCCGAAGTCCCCGGTGATCGGCTGCAGCATCGTGGATTATTCAGCCGGGGGCGCATGTCTGGAAGTCGCGCCGGGCACGTCGCTGCCGAAGCGCTTTGAACTGCTGTATTCCGGCACCAAGAAGAAGTGCCGCGTGGTCTGGACCGATCGCTCCCGGCTGGGTGTGGCATTCTAG
PROTEIN sequence
Length: 83
MHQERRFARIKPSGSLSKAGKIIIDPKSPVIGCSIVDYSAGGACLEVAPGTSLPKRFELLYSGTKKKCRVVWTDRSRLGVAF*