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SCNpilot_expt_300_bf_scaffold_12172_1

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 1..828

Top 3 Functional Annotations

Value Algorithm Source
TRAP transport system, permease protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JJ48_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 270.0
  • Bit_score: 493
  • Evalue 1.70e-136
trap transporter 4tm/12tm fusion protein similarity KEGG
DB: KEGG
  • Identity: 92.6
  • Coverage: 270.0
  • Bit_score: 493
  • Evalue 4.90e-137
TRAP transport system, permease protein {ECO:0000313|EMBL:AEI05502.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligo similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 270.0
  • Bit_score: 493
  • Evalue 2.40e-136

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Taxonomy

Oligotropha carboxidovorans → Oligotropha → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
GACATCCGTTATGTCGCGGCAATCGTCGGTGTGCTGGTTGCGATCTGCGCGATCACCCGCGGCGGCCGCGCGACGCTCGTCGCCTGCCGCGATTCGCTTGCCGACAGCGCCAAGTCCTCGCTCACGGTCGGCATGGCCTGCGCCATTGTCGGCGTGATCATCGGCATGATGACGCAGACCGGCGTCGGCACGGTGTTCGGAAGCTGGGTGATCGGCCTCGGCGAGCACAGCTTGTTCCTCGCGCTGATCCTGACCATGATCCTGTCGATTCTGCTCGGCACCGGCATTCCGACGATCCCGACCTACATCATCGTCGCCGCGCTTGCCGCGCCGGCGCTGTCGAAGCTCGATGTGCCGCTGATCGTCAGCCACATGTTCGCGTTCTACTACGGCATCATGGCGGACCTGTCGCCGCCGGTGGCGCTGGCGGCGTTCGCGGCCGCGCCGATCGCCAAGGAGAACCCGGACAAGATCGGTTGGGAGGCGATGCGCATCGCGCTTGCGGGCTATGTCATTCCGTTCATCGCGGTGTATTCGCCGGCCCTGATGCTGCAGACCGGCGATCCGATGGAAGCCAAGATCGGTTTCTACGGCGCGGTGATCTATGCCACGATCAAGGCGCTGATCGCGATCGGCCTGTTCGGCATGGTGGCGATCGGTTTCCTGTTCACGCGGATGTCGCTGCTGGAGCGGATCGTGGCTTTCATCGCCGCGCTGTTCCTGCTCGGCGAATTTCCCTACAGCGACGAGGTCGGTTTGGTGCTCGGGATCGTCTGCGTGCTTTGGCAGTGGCGCAAGCGGCCGGCGCCGGTCGTCGCCGCGGTGTAA
PROTEIN sequence
Length: 276
DIRYVAAIVGVLVAICAITRGGRATLVACRDSLADSAKSSLTVGMACAIVGVIIGMMTQTGVGTVFGSWVIGLGEHSLFLALILTMILSILLGTGIPTIPTYIIVAALAAPALSKLDVPLIVSHMFAFYYGIMADLSPPVALAAFAAAPIAKENPDKIGWEAMRIALAGYVIPFIAVYSPALMLQTGDPMEAKIGFYGAVIYATIKALIAIGLFGMVAIGFLFTRMSLLERIVAFIAALFLLGEFPYSDEVGLVLGIVCVLWQWRKRPAPVVAAV*