ggKbase home page

SCNpilot_expt_300_bf_scaffold_10176_3

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 1505..1819

Top 3 Functional Annotations

Value Algorithm Source
Blue (Type 1) copper domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V130_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 67.3
  • Coverage: 101.0
  • Bit_score: 143
  • Evalue 1.30e-31
Plastocyanin {ECO:0000313|EMBL:CEG10243.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacil similarity UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 101.0
  • Bit_score: 148
  • Evalue 7.20e-33
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 64.9
  • Coverage: 97.0
  • Bit_score: 136
  • Evalue 4.40e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
ATGTTGCCGGGGCGAAATCTGCTCGCGTTAACGTCCCTCGCGTGGGTGACGATGTTCGCCCCGGCGCATGCTGAGACGATCCAGGTCGTGGTCGACAAACTGGTGTTCAGCCCGGCCGAGATCAACGCCAGGGTCGGCGACACCATCGAATGGGTCAACAAGGATGTCATCGCCCACACCGCGACGGTGAAGGGCGAGTGGGATGTGATGATCCTGCCGAAGAAAAATGCGACCCTGGTGATCAAGAAGGCGGGATCGGTGGAGTATTACTGCCGCTTCCATCCGAACATGAAGGGCAGGATCACCGCGCACTAG
PROTEIN sequence
Length: 105
MLPGRNLLALTSLAWVTMFAPAHAETIQVVVDKLVFSPAEINARVGDTIEWVNKDVIAHTATVKGEWDVMILPKKNATLVIKKAGSVEYYCRFHPNMKGRITAH*