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SCNpilot_expt_300_bf_scaffold_14769_3

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(1610..2812)

Top 3 Functional Annotations

Value Algorithm Source
secretion protein HlyD id=12493890 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 41.2
  • Coverage: 313.0
  • Bit_score: 231
  • Evalue 1.80e-57
secretion protein HlyD similarity KEGG
DB: KEGG
  • Identity: 41.5
  • Coverage: 270.0
  • Bit_score: 212
  • Evalue 1.80e-52
Secretion protein HlyD {ECO:0000313|EMBL:AAZ96854.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 41.5
  • Coverage: 270.0
  • Bit_score: 212
  • Evalue 9.20e-52

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1203
ATGACTAGAATTGCCGTGGCGCTCCTGGCCCTGATGGCGATGGCGTGGACCGCGGGGCCCGGCCTGTCGCACGGCGTCTCGACCCATGCCGGCCATTCCCATCATGCGCCGGACCCGGCGGAGCGGCGCGACGCGCTGGTGATGCTGTGCCGCAGCGGCGGACTGCTCGCGATGGAGAGCGTGTCGGAGACGCAGACGAATGCGTCGTTTCGCACGTTCGGCCGTGTGATTCCCGATCCGACCCAGGTGCTCAACGTCAACGCCTATCTGAGCGGGCAGGTCACGCAGGTGCTGGTGCGGCCGCAGAGCGCGGTGCGCAAGGGCGACGTGGTCGCCAAGCTGTCGAGCCCGGATTTCCTGCTGACGCAGAAGGCCTATCTCGCGTTGCTGAACAATGAGGAACAGCAGGCCATTCTCAAGGAGGAGGGCCGCCTGCCGGCTTACCTGTCGGATGCGCGCGACAATCTGGTGTGGTGGGGCATGAGCGCGGAGGAAATCGACGCGCTGATCAAGAACGGCAAGGTGGTCGAGAGCATTTCGGTGCGCGCGCCGAGCGACGGCATCGTCACCGATGTGCTGGTGCAGCCCGGCCAGCTCGTCAACGCCGGCGACAAGACCATGCAGAACTTTGTCGTGGTCGGCAAAGCCCTGCTGCGCATGATTCCCTCGTCGGCGGCGCCATGGATCGAGGCTTATATCCCGGCCGATCGCGCCGCCGCGGTTCGCGCCGGCTCGCCGATGCTGGTGGAAATGCCGTCGGGATCGCCGGTCGCGCTCGACATCGCCGAAGTGCGGCCCGACGTCGAGCCGACCAGCCTGATGGCCCGCGCGGTCGCGCGGCTGAGGTGCAGGCCCGGATCGAGGTGCGCCGCCCGCCGGGCGTGTGGGTCTCGCGCGAGGCGGTGGCGGGGCAGGGCATCGAGCCGATCGTCTTCATCGAGATCAGGCCCGGCCTGTTCCAGCGCCGTCATATCGAGATGGCGGAAGCGGCGGGCGATTACATCCGCGTGTCGGGCGTCAAGCCCGGCGAGCGCGTCGTTACCTCCGGCAAGATGGTTCTGGAAGGGGCCTATCGTCTGCAGGAGAAGGAGCCGGAAGCGTCCGCGCGTTGCGGAGCGTAAGGGAGGGTTTGCGGAGTGTTCGACTGGATCATCTCCTGGTCGCTGCGTAACCGGATCGTGGTGCTGCTGGTCTATGTGCTGA
PROTEIN sequence
Length: 401
MTRIAVALLALMAMAWTAGPGLSHGVSTHAGHSHHAPDPAERRDALVMLCRSGGLLAMESVSETQTNASFRTFGRVIPDPTQVLNVNAYLSGQVTQVLVRPQSAVRKGDVVAKLSSPDFLLTQKAYLALLNNEEQQAILKEEGRLPAYLSDARDNLVWWGMSAEEIDALIKNGKVVESISVRAPSDGIVTDVLVQPGQLVNAGDKTMQNFVVVGKALLRMIPSSAAPWIEAYIPADRAAAVRAGSPMLVEMPSGSPVALDIAEVRPDVEPTSLMARAVARLRCRPGSRCAARRACGSRARRWRGRASSRSSSSRSGPACSSAVISRWRKRRAITSACRASSPASASLPPARWFWKGPIVCRRRSRKRPRVAERKGGFAECSTGSSPGRCVTGSWCCWSMC*