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SCNpilot_expt_300_bf_scaffold_24236_2

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(669..1253)

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NGD4_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 92.8
  • Coverage: 194.0
  • Bit_score: 329
  • Evalue 3.00e-87
PAS domain S-box protein {ECO:0000313|EMBL:EKS28066.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.; similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 194.0
  • Bit_score: 329
  • Evalue 4.30e-87
aer; aerotaxis receptor Aer similarity KEGG
DB: KEGG
  • Identity: 85.1
  • Coverage: 194.0
  • Bit_score: 303
  • Evalue 5.00e-80

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGACAGGCGCAGCTGTCGATCAGGCCCGGTCCGCGACCGATCGCGTCAGCACGCTCTCGCATGCCGCGGCGCGCATCGGCGATATCGTCGAGATGATCAACAATATCGCGGGCCAGACCAATCTGCTGGCGCTGAACGCGACGATCGAGGCGGCGCGGGCCGGCGAAGCCGGCCGCGGGTTCTCCGTGGTGGCCTCCGAGGTCAAGGCGCTCGCCGAGCAGACCGCCAAGGCGACCGGCGAGATCGGACGGCAGATCGGCGACATCCAGAGCGCAACGCAGGAATCCGTTGCGGCGATCGACGACATCAGCCGTTCGATCGAGCGACTCTCCGAGATTTCGTCCGCGATCGCATCCGCCATCGAGGAGCAGGGCGCGACCACGCAGGAGGTTGCCCGCAACGTGCAGCATGCCGCGCAGGGCGCCCAGCAGGTGTCCTCCAATGTCGGCAATCTGCAGCGTGGCGCGGAGGAGACAGGCGCGGCATCCTCGCAGGTGCTGTCCGCCGCGAAGACGCTGTCGCGCGACAGCAACCGGCTCAAACTGGAAGTGAACAAGTTCCTTGGGTCGGTCCGCGTCGCGTGA
PROTEIN sequence
Length: 195
MTGAAVDQARSATDRVSTLSHAAARIGDIVEMINNIAGQTNLLALNATIEAARAGEAGRGFSVVASEVKALAEQTAKATGEIGRQIGDIQSATQESVAAIDDISRSIERLSEISSAIASAIEEQGATTQEVARNVQHAAQGAQQVSSNVGNLQRGAEETGAASSQVLSAAKTLSRDSNRLKLEVNKFLGSVRVA*