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SCNpilot_expt_300_bf_scaffold_24236_4

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(2523..2771)

Top 3 Functional Annotations

Value Algorithm Source
Lipid-A-disaccharide synthase {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200}; EC=2.4.1.182 {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200};; TaxID=883080 species="Ba similarity UNIPROT
DB: UniProtKB
  • Identity: 70.7
  • Coverage: 82.0
  • Bit_score: 112
  • Evalue 2.60e-22
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182) similarity KEGG
DB: KEGG
  • Identity: 65.9
  • Coverage: 82.0
  • Bit_score: 107
  • Evalue 2.20e-21
Lipid-A-disaccharide synthase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKH5_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 70.7
  • Coverage: 82.0
  • Bit_score: 112
  • Evalue 1.90e-22

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 249
CGCCGCGTGGTGCGGGTCTCGTCGATCATCCTCGCCAACCTGGTGTTTGGCGAGAACGTCATTCCCGAGCTGCTGCAGGAGGAATGCGCCGCCGAGGTCATCGTGCCGAAGCTGTGCGAGGTGCTCGCCGACACGCCGCTGCGCCGGCGGGAACTCGAAGCTTTCGCGCGGCTCGATGCGGTGATGGAACCCGGCGCGCGTTCGCCGAGCGAGGCGGCCGCGGATATCGTGATCAGGATGCTCGGCTAG
PROTEIN sequence
Length: 83
RRVVRVSSIILANLVFGENVIPELLQEECAAEVIVPKLCEVLADTPLRRRELEAFARLDAVMEPGARSPSEAAADIVIRMLG*