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SCNpilot_expt_300_bf_scaffold_24310_1

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 3..845

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5L5_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 93.2
  • Coverage: 280.0
  • Bit_score: 525
  • Evalue 3.20e-146
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EFI51612.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 93.2
  • Coverage: 280.0
  • Bit_score: 525
  • Evalue 4.50e-146
receptor family ligand binding region family protein 18 similarity KEGG
DB: KEGG
  • Identity: 82.5
  • Coverage: 280.0
  • Bit_score: 473
  • Evalue 4.10e-131

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 843
TACAAGATCCCAATGGTGCAGGGCGGCGGCGCCTCCGACCAGATCTTCGCGCGCAAGTTCAAGTATATTTTCGGCACGCTGGCGCCGGCCAGCAATTATTTCGGCTCGACCATCGATATGATGAAGGACCTCAAGCCCGCGCCGAAATCGGTCGCGCTGCTTTATGCCGACGATTCCTTCGACGTCTCGGTCGCGGACGGCACCCGTCCGAAGCTGAAGGCCGCTGGCTTCGATGTGGTGATGGACGAGCGCTACAGCACCAACGCCACCGACTTCAACTCACTGCTGTCGCAGATCCGCAGCAAGAACGTCGACGCCGTGCTGGTCGCCGGCCACGAGACCGAGATTCTCAACTTCGTGCGTCAGGCCAAGAGCCTCACCGTCGCGCCGAAGATGTATTCCTTCACTGTCGGCGTGCCGAGTGAGGACTTCCGCAAGGCGCTCGGCAAGGACGCCGATTATGCTTTCGGCATGACCGCGTGGCTGCCGTCGGCGGCGCAGAAGGACCGCTGGTTCGGCGATGCCGAGAAGTTCGCCCAGGAATACAAGACCAAGTTCGGCTATGAGCCCGACTATCACGCGGCATCCGGCGCGGCCGATGTCGAGGCGCTGGTGCAGGCCATCGAGGAGGTCGGCTCGACCGACCCGGCCAAGGTGCGCGACGCGCTGGCCAAGGTGAAGTTCGAGAGCCTCTACGGCCCGATCGCGTTCGGCGAGAACGGCCAGATCGATCTGCCGCAGACCGTGATCCAGGTGCAGGGCGACGCGCTGGTCGCCATCCATGATGCGAAGGGCGCGCTCAAGCCGGCGAAGTATCCGATGCCGGCCTGGAATGCGCGCTAA
PROTEIN sequence
Length: 281
YKIPMVQGGGASDQIFARKFKYIFGTLAPASNYFGSTIDMMKDLKPAPKSVALLYADDSFDVSVADGTRPKLKAAGFDVVMDERYSTNATDFNSLLSQIRSKNVDAVLVAGHETEILNFVRQAKSLTVAPKMYSFTVGVPSEDFRKALGKDADYAFGMTAWLPSAAQKDRWFGDAEKFAQEYKTKFGYEPDYHAASGAADVEALVQAIEEVGSTDPAKVRDALAKVKFESLYGPIAFGENGQIDLPQTVIQVQGDALVAIHDAKGALKPAKYPMPAWNAR*