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SCNpilot_expt_300_bf_scaffold_24578_2

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(764..1237)

Top 3 Functional Annotations

Value Algorithm Source
Putative type IV prepilin peptidase, cpaA n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SDV8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 75.6
  • Coverage: 156.0
  • Bit_score: 246
  • Evalue 1.60e-62
Putative type IV prepilin peptidase, cpaA {ECO:0000313|EMBL:CCD92385.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.6
  • Coverage: 156.0
  • Bit_score: 246
  • Evalue 2.20e-62
type IV prepilin peptidase, cpaA similarity KEGG
DB: KEGG
  • Identity: 72.4
  • Coverage: 156.0
  • Bit_score: 241
  • Evalue 1.50e-61

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Taxonomy

Bradyrhizobium sp. ORS 375 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 474
GCGGCCTCGAGCGATCTCCTGACCATGACGATCTCGAACCGGGTCTCGCTGCTGCTGATCGCGGGGTTCCTGATCCTCGCCCCGCTCACCGGCATGCCGCTCGCCGCCATCGGCCTGCATGTCGTCGCCGGCATGGCCGTGCTGGTGGTCGCCTTCGCCTGCTTCGCCCTCGGCTGGATCGGCGGCGGCGACGCCAAGGTGGCGGCGGCCGCGGCGCTGTGGTTCGGCTTCGATCACCTGATGCCCTATCTGCTGTTCGCCGCGGTGTTCGGCGGCGCGCTGACCCTGCTGATGCTGCAGTTCCGGCAATGGCCGCTGCCTTACGCGCTGGCGGCGCAACCCTGGCTCAGCCGCCTGCATGGCCGCGACAGCGGCATTCCCTACGGCATCGCGCTCGCGCTCGGCGCGCTGATGGTCTACCCGCAGACCGCCTGGGTGCAGGCGGTGGACCTCGCCCGCCTGGCCATGCCCTGA
PROTEIN sequence
Length: 158
AASSDLLTMTISNRVSLLLIAGFLILAPLTGMPLAAIGLHVVAGMAVLVVAFACFALGWIGGGDAKVAAAAALWFGFDHLMPYLLFAAVFGGALTLLMLQFRQWPLPYALAAQPWLSRLHGRDSGIPYGIALALGALMVYPQTAWVQAVDLARLAMP*