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SCNpilot_expt_300_bf_scaffold_15413_2

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 453..842

Top 3 Functional Annotations

Value Algorithm Source
endoribonuclease L-PSP n=1 Tax=Afipia birgiae RepID=UPI0002DF4316 similarity UNIREF
DB: UNIREF100
  • Identity: 90.7
  • Coverage: 129.0
  • Bit_score: 240
  • Evalue 7.30e-61
Uncharacterized protein {ECO:0000313|EMBL:EKS30889.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.1
  • Coverage: 129.0
  • Bit_score: 235
  • Evalue 4.30e-59
endoribonuclease L-PSP similarity KEGG
DB: KEGG
  • Identity: 80.5
  • Coverage: 128.0
  • Bit_score: 210
  • Evalue 2.30e-52

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 390
ATGCCCCGCCGTCTGATTTCATCCGGATCCCCGTTCGAGAAGGTCGCCGGTTATAGCCGCGCCGTGGTCGACGGAGATTTCTGCTTCGTCGCCGGAACCACCGGCTACGATCCCGTCACCAGGAACCTGCCCGAGGACGTCGCCGAGCAGACCCGCAACTGCTTCAAGACCATCGCCATCGCGCTCAAGGATGGCGGCTTCGAGATGGCCGATATCGTGCGCGCGACCTATTACGTCACGGACGCCAAGGACTTCGATGCGGTGTTCGCGGTCTGCGGCGAAACGCTCGGCGACATCCGCCCGGCGGCCACGATCATCGCGGTTGCCGGCCTCTACAAGCCGGAGATGAAGGTCGAGATCGAAATTACCGCCAAGCACCGCACCGCCTGA
PROTEIN sequence
Length: 130
MPRRLISSGSPFEKVAGYSRAVVDGDFCFVAGTTGYDPVTRNLPEDVAEQTRNCFKTIAIALKDGGFEMADIVRATYYVTDAKDFDAVFAVCGETLGDIRPAATIIAVAGLYKPEMKVEIEITAKHRTA*