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SCNpilot_expt_300_bf_scaffold_17639_2

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(842..1666)

Top 3 Functional Annotations

Value Algorithm Source
Methyl-accepting chemotaxis sensory transducer n=2 Tax=Afipia RepID=D6V820_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 272.0
  • Bit_score: 455
  • Evalue 3.00e-125
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS29178.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.5
  • Coverage: 272.0
  • Bit_score: 454
  • Evalue 9.50e-125
methyl-accepting chemotaxis protein similarity KEGG
DB: KEGG
  • Identity: 34.3
  • Coverage: 271.0
  • Bit_score: 146
  • Evalue 1.10e-32

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
TTGATCGCGCCGGCGGAATGTTGTGACGAACTCTCGGGAACGGTCGATCTTTCTCACACGCAGCAGATTTGCGATCTGGTTGCGGAGAAGATGGGTTTCGACTGCTCTTTCATGGGACAAAAGGGTGTTATTCTGGCCTCCAATCTGCGCGGGCGGATCGGAACCGTGCATGCAGCGGCTGCGCGAGTCATGGCCGGAGAGGTGGATCAGTTTGAAGTCACCGCCGATATGGCCGCTGCCAGCAAGGGAACCATGCGCGAAGGCATCAACATGCCCGTCAATATCGATGGAAAGCGTATCGGCTCCTATGGCCTTGCCGGTCCGCTCGATACGGTCCGGCCTTTCGCTTATGTCATCACCAGTCTTGTGGGCTCGGTGATCGCGCTGCGCATCCAGGACGTGAGCCGGACCAACCACATCTCGCTCCAGGTGACGAAAGCCACCGGCGTGGCGGCCACCGCCGCCAAGGCGGCGGACGAGGCGGCCAAAGCCATGCTGTTTCTGAGCGAGACGACCTCGCGGATCGGCGACGTCGCCACGACTATCGGAAAGGTTGCAAAGCAGACCAATCTGCTGGCGCTGAATGCGACAATCGAGGCTGGCCGCGCCGGGAATATGGGCGTGGGGTTTGCCGTTGTGGCGCAGGAAGTGAAATTGTTGTCCGGTCAGACCGCCAAGGCAACGACCGATATCGGCGGCCAGATCGGGAAGGTTCAGGGCGCGGTGGGCGAAATGCGGCGCGCCGTGGAGGCCATGAACGACAGTATCAGGAATGTCAGCGCCATCGTCACGGAGATTGCGGACACCATACAGGAACCGCAGTGA
PROTEIN sequence
Length: 275
LIAPAECCDELSGTVDLSHTQQICDLVAEKMGFDCSFMGQKGVILASNLRGRIGTVHAAAARVMAGEVDQFEVTADMAAASKGTMREGINMPVNIDGKRIGSYGLAGPLDTVRPFAYVITSLVGSVIALRIQDVSRTNHISLQVTKATGVAATAAKAADEAAKAMLFLSETTSRIGDVATTIGKVAKQTNLLALNATIEAGRAGNMGVGFAVVAQEVKLLSGQTAKATTDIGGQIGKVQGAVGEMRRAVEAMNDSIRNVSAIVTEIADTIQEPQ*