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SCNpilot_expt_300_bf_scaffold_22206_2

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(546..1247)

Top 3 Functional Annotations

Value Algorithm Source
Hemolysin III family channel protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PEM1_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 74.2
  • Coverage: 233.0
  • Bit_score: 366
  • Evalue 1.60e-98
  • rbh
Hemolysin III family channel protein {ECO:0000313|EMBL:EKS36788.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broome similarity UNIPROT
DB: UniProtKB
  • Identity: 74.2
  • Coverage: 233.0
  • Bit_score: 366
  • Evalue 2.20e-98
hemolysin III similarity KEGG
DB: KEGG
  • Identity: 69.5
  • Coverage: 233.0
  • Bit_score: 336
  • Evalue 4.90e-90

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 702
ATGGCGGTATTTCGTCTCAAGCAGGTGCAGGCTGCTCCCGTCGCTTTGCGCGGCGACGTGATCCGCTGGGAATACGACCGCGCCGAGCTGATCGCGGACGGCGTGATCCATGTGCTCGGCATCGCCTTCAGCGTGATCGCGGCGAGCGTGCTGATCACGCTGGCGGCGATCTACGCCTCGCCCGCGCAGATTGTCTCGGTGTCGATCTACGCCGCCGGGCTGACGGCGATGCTCGGCATCTCGGCAACCTACAATCTGTGGCCGGTCTCGCCGGTGAAATGGCTGCTGCGGCGGTTCGACCATTCCGCGATCTATGTGCTGATCGCCGCGACCTATACGCCGTTCCTGGCGCAGATGCAGGATCGCGTGGTCGCCGTCGCGCTGCTGATCGGGGTGTGGTCGGTCGCCGCCATCGGCATCGCGCTGAAGGTGCTGCTGCCGGGGCGCTTCGACCGGCTGTCGATCGCGCTTTATCTCGCGCTCGGCTGGAGCGGCGTCGTCGCCTATGAGAGCGTGATGTCGTCGCTGCCCTCCACCACGCTGTGGCTGATCGCCGCGGGCGGCGTGCTCTATTCGGCGGGCGTGATCTTCCATGCCTGGCGGCGGCTGCGTTTCCAGAACGCGATCTGGCATTCCTTCGTGCTGCTCGCCGCCGCCTGCCATTATTCGGCGGTGGTCGATCTGGTGCTGATCTCGGCGTGA
PROTEIN sequence
Length: 234
MAVFRLKQVQAAPVALRGDVIRWEYDRAELIADGVIHVLGIAFSVIAASVLITLAAIYASPAQIVSVSIYAAGLTAMLGISATYNLWPVSPVKWLLRRFDHSAIYVLIAATYTPFLAQMQDRVVAVALLIGVWSVAAIGIALKVLLPGRFDRLSIALYLALGWSGVVAYESVMSSLPSTTLWLIAAGGVLYSAGVIFHAWRRLRFQNAIWHSFVLLAAACHYSAVVDLVLISA*