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SCNpilot_expt_300_bf_scaffold_19959_1

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 1..1203

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PI20_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 92.5
  • Coverage: 400.0
  • Bit_score: 761
  • Evalue 3.80e-217
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase similarity UNIPROT
DB: UniProtKB
  • Identity: 92.5
  • Coverage: 400.0
  • Bit_score: 761
  • Evalue 5.30e-217
ribosomal protein S12 methylthiotransferase similarity KEGG
DB: KEGG
  • Identity: 88.5
  • Coverage: 400.0
  • Bit_score: 730
  • Evalue 2.00e-208

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1203
GACGGCGCAGACCTCGTGATCGTCAACACCTGCGGCTTTCTCGACAGCGCCAAGCAGGAATCGCTCGGCGCCATCGGCGAGGCGATGGCCGAGAACGGCAAGGTGATCGTCACCGGCTGCATGGGCGCCGAGCCCGAGCAGATCGAAAAGGCGTATCCTAACGTGCTGTCGATCACCGGCCCGCAGCAATATGAGAGCGTGCTCGAGGCGGTGCATCGCGCGGTGCCGCCGGTGCACAACCCGCATCTCGATCTGTTGCCGCCGCAAGGCATCAAGCTGACGCCGCGGCATTACGCCTATCTGAAGATTTCCGAGGGCTGCAACAACCGTTGCACCTTCTGCATCATCCCGAAGCTGCGCGGCGACCTGGTGTCGCGGCAGGCGAATGACGTGCTGCGTGAGGCGGAACGGCTGGTTGCGGCAGGCGTCAAGGAATTGCTGGTGGTGTCGCAGGACACCTCCGCCTACGGCATCGACCTGAAATACGCGACCAGCCCGTGGAAGGATCGCGAGGTTCGCGCAAAATTCTACGATCTCGCCAGAGAGCTTGGCGAACTCGGCGCGTGGGTGCGCCTGCAATACGTCTACCCCTACCCGCATGTCGATGAGGTCATCGACCTGATGAGCGAGGGCAAGGTGCTGCCCTATCTCGACATCCCGTTCCAGCATGCAAGCCCCGACGTCTTGAAGCAGATGCGCCGGCCTGCCGCTCAGGACAAGACGCTGGCGCGGATCAAGGCGTGGCGCGAGCAATGCCCGGACCTCACGCTGCGTTCGACCTTCATCGTCGGATTTCCCGGCGAAACCGATTCTGATTTCCAGTATCTGCTCGACTGGCTGGATGAGGCGCAGATCGACCGGCTCGGCTGCTTCAAATACGAGCCGGTCGCAGGCGCGACCTCAAACAATCTCGAAGGCGCCGTGCCGGAAGAGACCAAGACCGCACGCTGGAATGCGCTGATGGCACGGCAAAAGAAAATTTCCGCGCAGCGCCTCAAGCGCAAGGTCGGCACGCGCCAGCAGGTGATCATCGACGAGGTCGGCCCCAGCGTCGCCAAGGGCCGCTCCAAGGCCGATGCGCCGCAGATCGACGGTTCGGTCTATGTCGCCAGCCGCCGCCCGCTCAAGGTCGGTGAGATCGTCACCGCGAAGATCGAGAGCGCCGACGAATACGACCTGCACGGAACGGTCGCGGGATTTTAA
PROTEIN sequence
Length: 401
DGADLVIVNTCGFLDSAKQESLGAIGEAMAENGKVIVTGCMGAEPEQIEKAYPNVLSITGPQQYESVLEAVHRAVPPVHNPHLDLLPPQGIKLTPRHYAYLKISEGCNNRCTFCIIPKLRGDLVSRQANDVLREAERLVAAGVKELLVVSQDTSAYGIDLKYATSPWKDREVRAKFYDLARELGELGAWVRLQYVYPYPHVDEVIDLMSEGKVLPYLDIPFQHASPDVLKQMRRPAAQDKTLARIKAWREQCPDLTLRSTFIVGFPGETDSDFQYLLDWLDEAQIDRLGCFKYEPVAGATSNNLEGAVPEETKTARWNALMARQKKISAQRLKRKVGTRQQVIIDEVGPSVAKGRSKADAPQIDGSVYVASRRPLKVGEIVTAKIESADEYDLHGTVAGF*