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SCNpilot_expt_300_bf_scaffold_23211_1

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 2..283

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Afipia sp. 1NLS2 RepID=D6V763_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 75.0
  • Coverage: 40.0
  • Bit_score: 61
  • Evalue 4.40e-07
Bacteriophytochrome cph2 {ECO:0000313|EMBL:CEG09452.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch d similarity UNIPROT
DB: UniProtKB
  • Identity: 75.0
  • Coverage: 40.0
  • Bit_score: 61
  • Evalue 6.10e-07

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 282
GACATTCCCAAGGGAGGCGCCGACGAGCTCGGCACGCTGATCGCCGCGATGGGCGTGATGCGCAACAACATCAAGGATATGGTCGAGCGCGAGATCGCATACGGACCGGCGGCCCATGCGCTTCCCGCGATCAATCCGCTGACGATGGCGATGCAAATCCGCTTGTCGCAGTGCTTCGCAAGGGAAAAAAGCGATCGGGATTTGTGCATTCATTCCTCCGTTGAAGGCCTCAAACGCAGGTCATCGCTTCGAGCGGCACGATGCACCAACTGGTTACCATGA
PROTEIN sequence
Length: 94
DIPKGGADELGTLIAAMGVMRNNIKDMVEREIAYGPAAHALPAINPLTMAMQIRLSQCFAREKSDRDLCIHSSVEGLKRRSSLRAARCTNWLP*