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SCNpilot_expt_300_bf_scaffold_21341_1

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(25..1131)

Top 3 Functional Annotations

Value Algorithm Source
TRAP transporter solute receptor n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QLJ6_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 67.4
  • Coverage: 362.0
  • Bit_score: 515
  • Evalue 3.30e-143
periplasmic mannitol-binding protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.5
  • Coverage: 368.0
  • Bit_score: 555
  • Evalue 4.10e-155
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 68.4
  • Coverage: 358.0
  • Bit_score: 513
  • Evalue 6.10e-143

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Taxonomy

R_Alphaproteobacteria_66_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1107
ATGCAACGTCGTAAGTTCATGAAAACCGCCGGTGTTGGCGGCGCAACGGCCGTGGCTGCAAGCGCGGTTGCGGCGCCGGCCATCGCGCAATCGATGCCGGAGGGGAAATGGCGCCTGGCCTCGAGCTTTCCGAAGTCGCTCGACACGCTCTACGGCGCGGCCGAGGCCTTCGCCAAATACTGCGCCGAAGTAACCGACAACAAGCTGCAAGTCCGCGTCTTTGCCGCCGGTGAAATCGTGCCCGGCCTGCAGGTCGCCGACGCGGTGCAGAACGGCACCGTCGAGATGGGCCATACGGCATCCTACTACTATATCGGCAAGGATCCGACCTTTGCCTTCGACACGGCGCTGCCGTTTGGCTTGAACGCGCGCCAGCAGGACGCCTGGATGAACTGGGGCGGCGGCCGGCAGGCGGTGAACGACTTCCTCAAGGACTACAACATCGTTGCCATTCCCTGCGGCAATACCGGCTGCCAGATGGGCGGCTGGTTCCGCAAGGAGATCAAGACGGTCGACGACCTCAAGGGGCTGAAGTTCCGCATCGGTGGCTTTGCTGGCCAGGTGCTGACGCCGCTCGGTGTCGTGCCGCAGCAGATCGCCGGCGGCGACATCTATCCGGCCCTGGAGAAGGGCACGATCGACGCCGCCGAATGGGTCGGGCCTTACGACGATCAGAAGCTCGGCTTCAACAAGGTGGCGCCGCACTACTACTATCCGGGCTGGTGGGAGGGCGGCCCGCAGCTCTCCAATTTCATCAACCTCGCGAAGTGGAACGAGCTGCCGGCGATCTACCGCTCGGTGATGGAGGTGGCATCGGCCAAGGCGCACACCCAGATGCTGGCCAAGTACGATGCACTCAATCCCAAGGCACTGCGCGAACTGGTGGCGGCCGGCACCAAGCTGGCGGCCTTCCCGCAGCCGGTGATGGAGGCCAGCCTCGCCTCGGCCAACAAGCTCTACGAGGAGACTTCGGCCAAGAACCCCAAGTTCAAGAAGGTCTACGACCAATGGCGGCAGTTCCGGAACGAGGAGGTGCTGTGGTTCCGGGTGGCCGAGAACACCTTCGACAACTTCATGGCGCGCCAGTCGGCGGCCAACAAGCTGTAG
PROTEIN sequence
Length: 369
MQRRKFMKTAGVGGATAVAASAVAAPAIAQSMPEGKWRLASSFPKSLDTLYGAAEAFAKYCAEVTDNKLQVRVFAAGEIVPGLQVADAVQNGTVEMGHTASYYYIGKDPTFAFDTALPFGLNARQQDAWMNWGGGRQAVNDFLKDYNIVAIPCGNTGCQMGGWFRKEIKTVDDLKGLKFRIGGFAGQVLTPLGVVPQQIAGGDIYPALEKGTIDAAEWVGPYDDQKLGFNKVAPHYYYPGWWEGGPQLSNFINLAKWNELPAIYRSVMEVASAKAHTQMLAKYDALNPKALRELVAAGTKLAAFPQPVMEASLASANKLYEETSAKNPKFKKVYDQWRQFRNEEVLWFRVAENTFDNFMARQSAANKL*