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SCNpilot_expt_300_bf_scaffold_29147_1

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 2..331

Top 3 Functional Annotations

Value Algorithm Source
Response regulator receiver protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9H2_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 93.6
  • Coverage: 109.0
  • Bit_score: 202
  • Evalue 1.90e-49
Putative transcriptional regulatory protein pdtaR {ECO:0000313|EMBL:CEG07954.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Af similarity UNIPROT
DB: UniProtKB
  • Identity: 93.6
  • Coverage: 109.0
  • Bit_score: 202
  • Evalue 2.60e-49
response regulator receiver domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 89.9
  • Coverage: 109.0
  • Bit_score: 196
  • Evalue 2.80e-48

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 330
GAAGTCATGATTCGGATGATGGTATCCGACATGCTCGAGGAACTCGGCTATCACGTCGCCGCCGAAGCCGGCGACATCGATGAAGCCGTGCGTCTTGTCCAGTGCACCGATTTCGACATCGCCATTCTCGACGTCAACGTCAACGGCAAGGTGATTTCGCCGGTGGCGGAGGCCGTGCAACTGCGCAAGCGTCCATTCGTGTTCGCCACCGGCTACGGCGTGCAGGGCCTGCCGGAGAAATTCCGCGATCGTCCCGCGCTGCAGAAGCCGTTCCAGATGGACACGCTGGCGCGCATGATCGAGGACACGCTGCGCGGCGTGGCCGCCTGA
PROTEIN sequence
Length: 110
EVMIRMMVSDMLEELGYHVAAEAGDIDEAVRLVQCTDFDIAILDVNVNGKVISPVAEAVQLRKRPFVFATGYGVQGLPEKFRDRPALQKPFQMDTLARMIEDTLRGVAA*