ggKbase home page

SCNpilot_expt_300_bf_scaffold_39330_1

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 114..1277

Top 3 Functional Annotations

Value Algorithm Source
transposase n=1 Tax=Methylosinus sp. LW4 RepID=UPI00035E1B72 similarity UNIREF
DB: UNIREF100
  • Identity: 80.5
  • Coverage: 395.0
  • Bit_score: 678
  • Evalue 4.10e-192
Transposase {ECO:0000313|EMBL:CEG10509.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacill similarity UNIPROT
DB: UniProtKB
  • Identity: 81.8
  • Coverage: 395.0
  • Bit_score: 676
  • Evalue 1.70e-191
transposase similarity KEGG
DB: KEGG
  • Identity: 72.7
  • Coverage: 395.0
  • Bit_score: 601
  • Evalue 1.40e-169

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1164
ATGGAGTTATTGAGCGTCATCCGACGCTGGCGCCATCGGGACCATTTCTCGATTCGGGAGATATCGCGGCGCACAGGTCTTTCGAGGAACACGGTTCGCAAATATCTGCGCAGCGACGGAGTTGAGCCCCGGTTCGCCGTTCCTGACCGCGCAAGCAAGCTCGATCCCTATGCCGACAAGCTGTCGCACATGCTCCGGCTGGAGGCGGGCAGGTCCCGCAAGCAGAAGCGGACGATCCGGCAGCTACACGCCGATCTGGTCAGCCTTGGATACGCGGGCTCCTACAATCGCGTGGCGGCGTTCGCGCGCGAGTGGAAGGCCGCCCGGCAGAGGGAGCAGCAGACCAGCAGTCGCGGCGCCTACGTGCCCCTGGCGTTCCAGCCAGGCGAGGCCTTCCAGTTCGACTGGTCGGAGGACTGGGCGATCATCGGCGGCGAGCGGACCAAGCTGCAGGTCGCCCACTTCAAGCTCTCCTACNCCTATTTGCAGCAAACCCATGAGATGCTGTTTGACGCCCACAACCACGCCTTCCAGGTCCTGGGCGGCGTCCCGCAGCGGGGCATCTACGACAACATGCGCACCGCGGTCGACAGGGTCGGCCGGGGCAAGCAGCGACAGGTCAACGCCCGCTTCTCGGCGATGGTCAGCCACTTCATGTTCGAGGCAGAGTTCTGCAATCCCGCATCAGGTTGGGAGAAAGGCCAGATCGAGAAGAACGTGCAGGACGCCCGGCATCGGCTCTGGCAGCCCATGCCGAACTTCCCGTCCCTGGCGGCGCTCAACGACTGGCTCGAGACGCGATGCCGGGAGCTCTGGACCGAGATCCCGCATGGGGTCCGACCCGGCTCGCTCGCCGACGCGTGGACCGAAGAGACCCCGCGCCTGATGGAGGTGACCCGGCCGTTCGACGGCTTCGTCGAATACGTCAAGCGCGTCTCGCCGACTTGCCTCGTCCACCTGGAGCGCAACCGATACAGCGCGCCAGCCTCCTTCGCCAACCGGCCAGTCAGCCTGCGCGTGTATCCCGAGCGGATCGCCGTCGTCGCAGAGGGGCGGGTCATCTGCGAGCATCGGCGCGTCTTCGCTCGCTCCCATAACCGTCAGAGCACGACGGTCTACGACTGGCGGCATTACCTCGCCGTTCTTCAGCGCAAGCCCGGCGCC
PROTEIN sequence
Length: 388
MELLSVIRRWRHRDHFSIREISRRTGLSRNTVRKYLRSDGVEPRFAVPDRASKLDPYADKLSHMLRLEAGRSRKQKRTIRQLHADLVSLGYAGSYNRVAAFAREWKAARQREQQTSSRGAYVPLAFQPGEAFQFDWSEDWAIIGGERTKLQVAHFKLSYXYLQQTHEMLFDAHNHAFQVLGGVPQRGIYDNMRTAVDRVGRGKQRQVNARFSAMVSHFMFEAEFCNPASGWEKGQIEKNVQDARHRLWQPMPNFPSLAALNDWLETRCRELWTEIPHGVRPGSLADAWTEETPRLMEVTRPFDGFVEYVKRVSPTCLVHLERNRYSAPASFANRPVSLRVYPERIAVVAEGRVICEHRRVFARSHNRQSTTVYDWRHYLAVLQRKPGA