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SCNpilot_expt_300_bf_scaffold_2086_5

Organism: SCNPILOT_EXPT_300_BF_Burkholderiales_70_5_fragment2

partial RP 2 / 55 BSCG 2 / 51 ASCG 2 / 38
Location: comp(3691..4626)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI0003643DBF similarity UNIREF
DB: UNIREF100
  • Identity: 52.0
  • Coverage: 302.0
  • Bit_score: 304
  • Evalue 1.70e-79
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 298.0
  • Bit_score: 304
  • Evalue 4.70e-80
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACS21533.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovo similarity UNIPROT
DB: UniProtKB
  • Identity: 52.3
  • Coverage: 298.0
  • Bit_score: 304
  • Evalue 2.30e-79

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 936
ATGGATACCCTGGAGCTCTTGCGCACGTTTCGCGAGGTGGCTCGACGCCACAGCTTCTCGGCGGCGGCCCGCACCCTAGATCTGGCACCCGCCACGGTGAGCAAGTACGTGGCCGAGCTGGAGACACGCTTTCACCTTCGTCTGTTCAACCGCAGCACGCGCCGGGTGTCGCTGACCGACGCCGGCCAGCTGCTGCTGGAGCACAGCGGGCGGGTGGTCGACCTGATCGACCAGACCGAGGACGCCATGAACGACCGTGCCCACCGACCCGGCGGGTGGCTGAACCTGGCCGCGCCGCACGGGCTGACGCGCACGGTGCTGGTGCGCCGACTGGCCGACTTCATGCTGCGCCACCCCGACGTCTCGGTCCATCTGCACCTGACCAACCGGCTGGTCGATCTGGCCGAGGACGGCATTGACGTCGCCTTCCGCATCGGCGCGGTGGCCGACAGCAGACTGATCGTGCGCCGCCTGCAGCAGATCGAAATGGTGGTGGCCGCCACCCCGGGGTACTGGCACGCGCATGGCCGCCCCGATCACCCGCGAGAACTGTCCACCCATCGCACGCTGGCCATGGCGCCGCCGGGCGAGACGCCCCACTGGCAATTCAACGTCGGGGGCAAGCTGCTCGACCTGCCCTTGCGGGCGGTCTTCACCGCCACCGACTTCTCGCCCCTGGTGCCGCTGGCGCTCAAGGGTGTCGGCGTGGTGCGCGGCTCACGGATGCTGATGGGTGACTGGATCGAGGCCGGAAAGCTGGAGCCGCTGTTTGCCCAGTATTCGCCCCGCAACCTGTGGCTCTACGCCGCCTACGCCCAGCGCCGCAACCCCAGCGCCGCATTGCGCGCGCTGCTGGATTTTCTGGAAGAGCAGCGGCGCCAGCCACCCTCCGGCGACGCGGAAGAACCTCCCGGCGCGGCGCGCCTAGACACATGA
PROTEIN sequence
Length: 312
MDTLELLRTFREVARRHSFSAAARTLDLAPATVSKYVAELETRFHLRLFNRSTRRVSLTDAGQLLLEHSGRVVDLIDQTEDAMNDRAHRPGGWLNLAAPHGLTRTVLVRRLADFMLRHPDVSVHLHLTNRLVDLAEDGIDVAFRIGAVADSRLIVRRLQQIEMVVAATPGYWHAHGRPDHPRELSTHRTLAMAPPGETPHWQFNVGGKLLDLPLRAVFTATDFSPLVPLALKGVGVVRGSRMLMGDWIEAGKLEPLFAQYSPRNLWLYAAYAQRRNPSAALRALLDFLEEQRRQPPSGDAEEPPGAARLDT*