ggKbase home page

SCNpilot_expt_300_bf_scaffold_12092_7

Organism: SCNPILOT_EXPT_300_BF_Burkholderiales_70_5_fragment2

partial RP 2 / 55 BSCG 2 / 51 ASCG 2 / 38
Location: comp(3972..4901)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2L123_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 48.6
  • Coverage: 294.0
  • Bit_score: 281
  • Evalue 1.20e-72
Transcriptional regulator {ECO:0000313|EMBL:EJL78968.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF31 similarity UNIPROT
DB: UniProtKB
  • Identity: 48.6
  • Coverage: 294.0
  • Bit_score: 281
  • Evalue 1.60e-72
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 49.8
  • Coverage: 293.0
  • Bit_score: 275
  • Evalue 1.40e-71

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 930
ATGGACTCGCTCGACCTGATCCAGACCTTTCGCGAGGTGGCGCGGCGCGGCAGCTTTTCCGGCGCCGCGCGGGCGCTGGGCATGTCGCCGGCGCGCTTTGGCCTGCGGCTGTTTCACCGCACCACGCGCAAGGTGACGCTGACCGAGGCCGGCGAGCTGCTGTTCGAGCGCAGCGGCGCGGTGCTGGAGCTGATCGACTTCACCCAGGGCGAGATGCAGGAGCGCGCCACCCGCCCGGTGGGCCGCCTGGCGCTCACCGCCCCGCACGCGCTGATGGCCACCGAGCTGCCGGCGTTGCTGGGCCGCTTCATGCAGCACTACCCCGGGGTGACGCTGCACCTGCACGTCACCAACCGCACGGTCAACCTGGTCGACGAAGGAGTGGACCTGGCGTTTCGCGTCGGCCAGATCCTGGAGCCCAACCTGATCGTGCGCCGCCTGCTGCGGCTGGACCACGTGGCCGCGGCCACCCCGGCCTACTGGGACCGGCGCGGCCGCCCGACGCACCCGAACGAGCTGCCAGGGCACGACCAGCTGGCCTTCGCCCTGCCCGGCGAGGCGCCGCACTGGCGGTTCCACGACCGCGGCAAGCCGCTGGAGCTGCTGCTGACGCCGCGCTTCGCCGCCACCGACCCGGCGCCACTGAAGACCTGGGCCGCGCAGGGCCTGGGCGTGGTGTGGGGCTCGGTCCACTGGCTGGCCGACCTGCTGGCCAGCGGCACGCTGGAGCCGCTGCTGCACGACTACTCGCCGCCCGAAGTCTGGCTGTACGTCGGCTACATGCAGCGGCGCCACAGCAGCGCCGCCCTGCGCGCCCTGCTGGACTACCTGGACGCGCACTTCCAGCCGCCGCCCATGCCCGCCCTGCCCGCCGCCGGGCGCAAGCGGGCCCGGGCCAGGGCGGCGCCGTCGCCGGATGGGCAAGGGTGA
PROTEIN sequence
Length: 310
MDSLDLIQTFREVARRGSFSGAARALGMSPARFGLRLFHRTTRKVTLTEAGELLFERSGAVLELIDFTQGEMQERATRPVGRLALTAPHALMATELPALLGRFMQHYPGVTLHLHVTNRTVNLVDEGVDLAFRVGQILEPNLIVRRLLRLDHVAAATPAYWDRRGRPTHPNELPGHDQLAFALPGEAPHWRFHDRGKPLELLLTPRFAATDPAPLKTWAAQGLGVVWGSVHWLADLLASGTLEPLLHDYSPPEVWLYVGYMQRRHSSAALRALLDYLDAHFQPPPMPALPAAGRKRARARAAPSPDGQG*