ggKbase home page

SCNpilot_expt_300_bf_scaffold_29445_1

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_unbinned_fragments_61_129

partial RP 0 / 55 BSCG 1 / 51 ASCG 0 / 38
Location: 1..435

Top 3 Functional Annotations

Value Algorithm Source
fimbrial protein pilin; K02655 type IV pilus assembly protein PilE id=12497894 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 64.4
  • Coverage: 146.0
  • Bit_score: 177
  • Evalue 1.10e-41
fimbrial protein pilin; K02655 type IV pilus assembly protein PilE Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.2
  • Coverage: 153.0
  • Bit_score: 157
  • Evalue 1.60e-35
fimbrial protein pilin similarity KEGG
DB: KEGG
  • Identity: 56.6
  • Coverage: 145.0
  • Bit_score: 147
  • Evalue 3.40e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 435
CCAAATCGCGAGAAGGGGATGACCCTGATCGAACTGATGATCGTGGTGGTGATCATCGGCATCCTGGCGGCCATTGCTTACCCGAACTACGCGCAGTACGTGCAGCGAGGGAATCGGGCGGAGGCGCGATCCATCCTTCTGGAAAACGCACAGATATTGGAGCGTAATTACACGACGGCTAATCGCTACGATGATACAAGACAGGATGGCACAGGCGGGGCGCCCGTGATCATTGCACAATCACCCAAAACTGGCACACCAAAGTACAACATCGCTCCAGCTTATGGTGCGGCGCCTGCCCAGACATTCAGATTGACTGCTTCCCCTGTTGTTGGCGGACCCATGGCTAGCGATGTCTGTGGGGCCCTTACGCTTGATAATACAGGGGTGCGTGGGCAAGGAGGCGGTACGACAGATGTGTGCTGGGGGAAATAA
PROTEIN sequence
Length: 145
PNREKGMTLIELMIVVVIIGILAAIAYPNYAQYVQRGNRAEARSILLENAQILERNYTTANRYDDTRQDGTGGAPVIIAQSPKTGTPKYNIAPAYGAAPAQTFRLTASPVVGGPMASDVCGALTLDNTGVRGQGGGTTDVCWGK*