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SCNpilot_expt_300_bf_scaffold_2281_curated_3

Organism: scnpilot_dereplicated_Actinobacteria_2

partial RP 28 / 55 BSCG 30 / 51 MC: 1 ASCG 10 / 38 MC: 3
Location: comp(1720..3186)

Top 3 Functional Annotations

Value Algorithm Source
Putative ABC-type transporter, integral membrane subunit n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4YVF9_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 43.7
  • Coverage: 426.0
  • Bit_score: 313
  • Evalue 3.30e-82
Putative ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:CCM61804.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.7
  • Coverage: 426.0
  • Bit_score: 313
  • Evalue 4.60e-82
inner-membrane translocator similarity KEGG
DB: KEGG
  • Identity: 43.9
  • Coverage: 419.0
  • Bit_score: 297
  • Evalue 7.70e-78

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Taxonomy

Candidatus Microthrix parvicella → Candidatus Microthrix → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1467
ATGATCTCGTGGGCGATGGGGTCGTCGCTGGCGGCGCTGGCCGGGATCCTCTTCGCCGGGAGCCAGGGCTCGCTGGCCCACCTGCCGCTCACCCTGCTGGTGATCAACGCGTACGGCGCGGCCATGTTCGGCCGGCTGCGGAGCCTGCCGCTCACGTTCCTGGGCGCCGGGCTCATCGGCCTGGTCTCGTCGTACTCGATCGGCTACCTCACGCTCGACGTCCCGCTGCACTCCGTGTTCGGGCACGAGCTGTCGACGCCCATCTCGCTCAACGGGTTCCGCTCGTCGATCCCGATCATCATCCTGTTCATCGTCTTGCTGTTCCTCCCGCCGCTGCGGGTGCGGGCCGGGGCGCAGCTCAAGTCCCGCGAGATCATCCCGTCGCCGGGCCCGGCCCGGTGGCTGATCGGCACCGTGGTGCTGGGTGCGGCGGCGTTCGCGTTCGCCACGCTCTACGACGGTCTGCGCACCTTCCAGATGGGCCAGGGCCTGGCCCTCGGCATCGTCATGCTGTCGCTGGTGCCGCTCATCGGGTACGCCGGGCAGATCTCGCTGGCCCCCATGGCCTTCGCCGGCATCGGCGCCCTGGTCATGGGCAACTGGGGCGGCGACGGCACCGTCTGGGGCCTGGTGCTCGCCGTGGTCGTCACCGCGCTGGTCGGCGGCCTGGTGGCCCTGCCCGCCATCCGCCTGCGGGGTCTCTACCTGGCGCTGGCCACGGCCGCGTTCGCCGTGATGATGGACAACCTGGTCTTCAACCAGAACGCGGTGATGCCCAACGGCAGCCTGGCGGTCGGCCGGCTCGACGTGGGGCCGGTCTCGTTCGACGGCGACCGCGCCCACCTGGTGCTCATCGGCGTGGTGTTCGGGCTGGTGGCCACGCTGCTGGTCTGGATGCGCAACCGTCCGTTCGGGCGTCGCCTCCTGGCCATGAAGTCCAGCGATGCCGCCTGCGTCACCCTGGGCGTGAACCTGGCCACCACCAAGCTCCAGGTGTTCACCCTGAGCGCCGGCATCGCCGGGCTCGGCGGTGCGCTGTACGCCGCCCAGCTCAACTCCGTGAGCCCGCCCACCTTCCAGTTCCTGAACGGGCTGCCGGTCGTGCTGCTCGCCGTCATCGGCGGGATCGCAGCGGTGGGCGGTGCGCTGTTCGGCGGCATCATCTACGCGGCCACGTTCCTGATCCTCCCCGACGTGTGGCCGGCGCTCACCAACATCCTCGTGCTCACCCCGGCCCTCGCCGGGANNNNNNNNNNNNGCCCGTGCCGCCGATGCGCAGGGCACCCCGGTGTCGGACCTCGATGCCATGGGCATCGACGGGTTCAGCGACATCGACCGGGTCGAGCTGGACCGGGCGACGGGGCTCGACACCGAACCGCTCTACGGGCCGATCCGGCCGTCGAGCCGGGCCGACCAGGAGGTGCTGGTCCGTGGCTGAGACCCCGCTGCTCGCCGCCCAGGACCTGA
PROTEIN sequence
Length: 489
MISWAMGSSLAALAGILFAGSQGSLAHLPLTLLVINAYGAAMFGRLRSLPLTFLGAGLIGLVSSYSIGYLTLDVPLHSVFGHELSTPISLNGFRSSIPIIILFIVLLFLPPLRVRAGAQLKSREIIPSPGPARWLIGTVVLGAAAFAFATLYDGLRTFQMGQGLALGIVMLSLVPLIGYAGQISLAPMAFAGIGALVMGNWGGDGTVWGLVLAVVVTALVGGLVALPAIRLRGLYLALATAAFAVMMDNLVFNQNAVMPNGSLAVGRLDVGPVSFDGDRAHLVLIGVVFGLVATLLVWMRNRPFGRRLLAMKSSDAACVTLGVNLATTKLQVFTLSAGIAGLGGALYAAQLNSVSPPTFQFLNGLPVVLLAVIGGIAAVGGALFGGIIYAATFLILPDVWPALTNILVLTPALAGXXXXXPCRRCAGHPGVGPRCHGHRRVQRHRPGRAGPGDGARHRTALRADPAVEPGRPGGAGPWLRPRCSPPRT*