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SCNpilot_expt_300_bf_scaffold_4266_curated_3

Organism: scnpilot_dereplicated_Actinobacteria_2

partial RP 28 / 55 BSCG 30 / 51 MC: 1 ASCG 10 / 38 MC: 3
Location: comp(2320..3069)

Top 3 Functional Annotations

Value Algorithm Source
Integrase catalytic region n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8KXN2_FRASN similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 250.0
  • Bit_score: 256
  • Evalue 2.50e-65
integrase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 250.0
  • Bit_score: 256
  • Evalue 7.70e-66
Integrase catalytic region {ECO:0000313|EMBL:ABW12816.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 250.0
  • Bit_score: 256
  • Evalue 3.40e-65

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Taxonomy

Frankia sp. EAN1pec → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 750
GTGATCCAGCAACTGGTCGTGCAGATGGCAGCCGAGAACCCGACCTGGGGGTACCGGCGGATCCACGGCGAACTCGTCGGGCTCGGCCATCAGATCGCAGCCTCGACGGTGTGGCAGATCCTCAAGAACCACCAGGTCTCCCCTGCCCCACACCGCGCGTCGGTGACTTGGTCGGCGTTCCTGCGTTCCCAAGCCGCCGTGGCCTGTGACTTCGCGTGCGTCGACACTGTCGGTCTGCGCCGCTACTACCTGCTGTTCTTCATCGACATCGAGACCCGCCGGGTCTTCCACGCCGGAATCACCGCCCACTCCACCGGGGAGTGGACTACCCAAGCGGCACGCAACCTGTTCCTCCGCCACCACAACGCGCTCACCGGCTGCAAGGCGCTCGTGCGCGACCGAGGGAGCCAATTCACGGCCGCGTTCGACGAGATCTTCCGAAGCGAAGGCATCAAGATCCTCCAGACGCCCGTGCGGACCCCAGTGGCCAACGCGTTCGCCGAACGGTGGATCGGCACCCTTCGCCGCGAGCTCCTCGACCGCACCCTCATCTGGAACCAGCAGCAGCTCGAGCGGCTCGTTGTGGACTACATCGACCACTACAACAAGCACCGACCCCACCGCTCGCTCGACCAACATCCGCCATCGCCCGCTGAAGCGACCCCGATGAGCTCGCCGCGCGATCACGCTCAGCTACGTCGATCAAGCCGATGCGACGGGCTCATCAACGAGTACCGAAACGCAGCCTGA
PROTEIN sequence
Length: 250
VIQQLVVQMAAENPTWGYRRIHGELVGLGHQIAASTVWQILKNHQVSPAPHRASVTWSAFLRSQAAVACDFACVDTVGLRRYYLLFFIDIETRRVFHAGITAHSTGEWTTQAARNLFLRHHNALTGCKALVRDRGSQFTAAFDEIFRSEGIKILQTPVRTPVANAFAERWIGTLRRELLDRTLIWNQQQLERLVVDYIDHYNKHRPHRSLDQHPPSPAEATPMSSPRDHAQLRRSSRCDGLINEYRNAA*