name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_300_bf_scaffold_276_curated_91
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
100737..103289
|
PAS sensor protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U124_ALIDB
pas sensor protein
Pas sensor protein {ECO:0000313|EMBL:GAO23410.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
|
|
SCNpilot_expt_300_bf_scaffold_276_curated_92
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
103286..103912
|
Response regulator receiver n=2 Tax=Alicycliphilus denitrificans RepID=E8U123_ALIDB
response regulator receiver
Response regulator protein {ECO:0000313|EMBL:GAO22125.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
|
|
SCNpilot_expt_300_bf_scaffold_276_curated_93
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
103995..104843
|
methylenetetrahydrofolate dehydrogenase (nadp(+)) (EC:1.5.1.5); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
Bifunctional protein FolD n=2 Tax=Alicycliphilus denitrificans RepID=E8U122_ALIDB
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
SCNpilot_expt_300_bf_scaffold_276_curated_94
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
104881..106914
|
Oligopeptidase A {ECO:0000313|EMBL:AEB84775.1}; EC=3.4.24.70 {ECO:0000313|EMBL:AEB84775.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Oligopeptidase A n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GCB6_ALIDK
|
|
SCNpilot_expt_300_bf_scaffold_276_curated_95
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
107037..107684
|
Glutaredoxin n=2 Tax=Alicycliphilus denitrificans RepID=E8U120_ALIDB
glutaredoxin
Glutaredoxin {ECO:0000313|EMBL:GAO23414.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
|
|
SCNpilot_expt_300_bf_scaffold_276_curated_96
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(107688..108377)
|
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Ribose-5-phosphate isomerase A n=2 Tax=Alicycliphilus denitrificans RepID=E8U119_ALIDB
|
|
SCNpilot_expt_300_bf_scaffold_276_curated_97
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
108413..109459
|
dihydroorotate dehydrogenase (EC:1.3.98.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00054567}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:0000256|HAMAP-Rule:MF_00225}; Dihydroorotate oxidase {ECO:0000256|HAMAP-Rule:MF_00225}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Dihydroorotate dehydrogenase (quinone) n=2 Tax=Alicycliphilus denitrificans RepID=E8U118_ALIDB
|
|
SCNpilot_expt_300_bf_scaffold_276_curated_98
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(109517..109816)
|
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U117_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO23417.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
|
|
SCNpilot_expt_300_bf_scaffold_276_curated_99
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(109816..110079)
|
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U116_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO23418.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
|
|
SCNpilot_expt_300_bf_scaffold_276_curated_100
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(110204..110512)
|
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U115_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU99952.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
|
|
SCNpilot_expt_300_bf_scaffold_276_curated_101
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(110645..111757)
|
FAD dependent oxidoreductase n=2 Tax=Alicycliphilus denitrificans RepID=E8U114_ALIDB
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:GAO23420.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
|
|
SCNpilot_expt_300_bf_scaffold_276_curated_102
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(112059..112787)
|
DNA polymerase III subunit epsilon (EC:2.7.7.7); K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7]
DNA polymerase III, epsilon subunit n=2 Tax=Alicycliphilus denitrificans RepID=E8U113_ALIDB
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:GAO23434.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
|
|
SCNpilot_expt_300_bf_scaffold_276_curated_103
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(112787..113125)
|
Ferredoxin, 2Fe-2S type, ISC system n=2 Tax=Alicycliphilus denitrificans RepID=E8U112_ALIDB
(2Fe-2S)-binding protein; K04755 ferredoxin, 2Fe-2S
Ferredoxin, 2Fe-2S type, ISC system {ECO:0000313|EMBL:AEB84766.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
SCNpilot_expt_300_bf_scaffold_276_curated_104
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(113148..115016)
|
Chaperone protein HscA homolog n=2 Tax=Alicycliphilus denitrificans RepID=E8U111_ALIDB
Fe-S protein assembly chaperone HscA; K04044 molecular chaperone HscA
Chaperone protein HscA homolog {ECO:0000256|HAMAP-Rule:MF_00679}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
|
|
SCNpilot_expt_300_bf_scaffold_276_curated_105
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(115050..115568)
|
Co-chaperone protein HscB homolog n=2 Tax=Alicycliphilus denitrificans RepID=E8U110_ALIDB
co-chaperone hsc20; K04082 molecular chaperone HscB
Co-chaperone protein HscB homolog {ECO:0000256|HAMAP-Rule:MF_00682}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
SCNpilot_expt_300_bf_scaffold_276_curated_106
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(115625..115948)
|
Iron-sulfur cluster assembly protein IscA n=2 Tax=Alicycliphilus denitrificans RepID=E8U109_ALIDB
iron-sulfur cluster assembly protein isca; K13628 iron-sulfur cluster assembly protein
Iron-sulfur cluster assembly protein IscA {ECO:0000313|EMBL:ADU99946.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
|
|
SCNpilot_expt_300_bf_scaffold_276_curated_107
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(115956..116357)
|
FeS cluster assembly scaffold IscU n=2 Tax=Alicycliphilus denitrificans RepID=E8U0L0_ALIDB
fes cluster assembly scaffold iscu; K04488 nitrogen fixation protein NifU and related proteins
FeS cluster assembly scaffold IscU {ECO:0000313|EMBL:AEB84762.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
SCNpilot_expt_300_bf_scaffold_276_curated_108
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(116380..117600)
|
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00038344}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00063383};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Cysteine desulfurase n=2 Tax=Alicycliphilus denitrificans RepID=E8U0K9_ALIDB
|
|
SCNpilot_expt_300_bf_scaffold_276_curated_109
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(117676..118212)
|
Iron-sulfur cluster assembly transcription factor IscR n=2 Tax=Alicycliphilus denitrificans RepID=E8U0K8_ALIDB
iron-sulfur cluster assembly transcription factor iscr; K13643 Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:AEB84760.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
SCNpilot_expt_300_bf_scaffold_276_curated_110
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(118449..120536)
|
UvrABC system protein B n=2 Tax=Alicycliphilus denitrificans RepID=E8U0K7_ALIDB
excinuclease ABC subunit B; K03702 excinuclease ABC subunit B
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
SCNpilot_expt_300_bf_scaffold_276_curated_111
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
120652..121848
|
Aspartate transaminase {ECO:0000313|EMBL:ADU99941.1}; EC=2.6.1.1 {ECO:0000313|EMBL:ADU99941.1};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Aspartate transaminase n=2 Tax=Alicycliphilus denitrificans RepID=E8U0K6_ALIDB
|
|
SCNpilot_expt_300_bf_scaffold_276_curated_112
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(121958..124384)
|
UPF0313 protein Alide2_2393 n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GC98_ALIDK
hypothetical protein
UPF0313 protein Alide2_2393 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
SCNpilot_expt_300_bf_scaffold_276_curated_113
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(124461..124919)
|
Azurin blue-copper protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GC97_ALIDK
azurin blue-copper protein
Azurin {ECO:0000313|EMBL:GAO23445.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
|
|
SCNpilot_expt_300_bf_scaffold_276_curated_114
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
125101..125691
|
Uncharacterized protein family UPF0029, Impact, N-terminal protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U0K3_ALIDB
hypothetical protein
Uncharacterized protein family UPF0029, Impact, N-terminal protein {ECO:0000313|EMBL:ADU99938.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
|
|
SCNpilot_expt_300_bf_scaffold_276_curated_115
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(125705..127042)
|
Probable D-serine dehydratase {ECO:0000256|HAMAP-Rule:MF_01030}; EC=4.3.1.18 {ECO:0000256|HAMAP-Rule:MF_01030};; D-serine deaminase {ECO:0000256|HAMAP-Rule:MF_01030}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Probable D-serine dehydratase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GC95_ALIDK
|
|
SCNpilot_expt_300_bf_scaffold_276_curated_116
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(127048..128421)
|
RNA methyltransferase, trma family; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01010}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U0K1_ALIDB
|
|
SCNpilot_expt_300_bf_scaffold_276_curated_117
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(128551..128871)
|
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U0K0_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU99935.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
|
|
SCNpilot_expt_300_bf_scaffold_276_curated_118
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(128927..129535)
|
2',5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-]
2',5' RNA ligase n=2 Tax=Alicycliphilus denitrificans RepID=E8U0J5_ALIDB
2',5' RNA ligase {ECO:0000313|EMBL:GAO23453.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
|
|
SCNpilot_expt_300_bf_scaffold_276_curated_119
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(129532..130143)
|
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WL86_DELAC
Uncharacterized protein {ECO:0000313|EMBL:GAO23396.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
|
|
SCNpilot_expt_300_bf_scaffold_276_curated_120
unknown
|
Not on your lists |
130156..130395
|
This feature has no annotations |