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SCNpilot_expt_300_bf_scaffold_250_curated_48

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 55455..56390

Top 3 Functional Annotations

Value Algorithm Source
FecR n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6XZ34_9RHOO similarity UNIREF
DB: UNIREF100
  • Identity: 60.0
  • Coverage: 305.0
  • Bit_score: 351
  • Evalue 1.20e-93
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:EZP53784.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.5
  • Coverage: 316.0
  • Bit_score: 398
  • Evalue 7.00e-108
FecR; K07165 transmembrane sensor similarity KEGG
DB: KEGG
  • Identity: 57.2
  • Coverage: 325.0
  • Bit_score: 347
  • Evalue 5.40e-93

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Taxonomy

Delftia sp. RIT313 → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 936
ATGAACCACAACGCCCCCCGCATCGCCCGCGAGGCCGCGCAGTGGCTCGTGCGCCTGCAGGCCGGCGAGGCCGACGGCGGCGCCCTGGCCCGCTGGCGTGCCGCCGACCCGCACCACGAGGCCGCCTGGCAGCGCGCCGAGGCCGTGCTGCACACGCTCGGGCGCGCCCACGGGCCGCTGGGCGCGCAGGCGCTGCGCGCATCCGGCGGCGCCGGCCGGCGCGCCGCCACGCGCCTGCTGGCCGCGCTGATCATTGCCGGCCCCGCCGGCTGGGCCGCGTGGCGGCTCGCGCCCTGGGCCGCCTGGACGGCGGCCGAGCGCACCGCCACCGGCGAGCGACGCTGGCTGGATTTGCCCGATGGCGGCCGCCTGCTGCTCGACACCGCCAGCGCCGCCGACGTGGCCTACACAGCGCAAGCGCGCCGCGTCGTGCTGCACACCGGCGCGCTGTGGGTGCAGACCGCGCGCGACGCCGCCGCCCGCCCCTTCCTCGTGCAGGCGCCGCAGGGCACGGCGCGCGCGCTCGGCACCCGCTTCAGCGTGCGCATCGCCGGCGAGGCCACCCGCGTTGCGGTGGCCGAGGGCGCGGTGGAGCTGCGCCCCGCGCGCGGCGGCGCGCCCGTGCACGTCAGCGCCGGCATGCAGGCCACGCTGACGGCCGGCGCCGCCGGCCCCGCCAGCGCGCGCGACGCCCTGGCCGACGGCTGGACCGAGGGCGTGCTCTACGCCGAGCGCATGCCCCTGGGCGAGTTCACCGCCGAACTCGCGCGCTACCGCCCCGGCCTGCTGCGCTGCGCGCCCGAAGTGGCGGCGCTGCCGGTCAGCGGTGCGTTCCAGCTCGCCGACACCGACGCGGCACTCGCCGCGCTGGCCGCCTCGCTGCCCGTGCGCATCGAGCTGCGCACGCGCTGGTGGGTGATGATCGGGCCGGCATAG
PROTEIN sequence
Length: 312
MNHNAPRIAREAAQWLVRLQAGEADGGALARWRAADPHHEAAWQRAEAVLHTLGRAHGPLGAQALRASGGAGRRAATRLLAALIIAGPAGWAAWRLAPWAAWTAAERTATGERRWLDLPDGGRLLLDTASAADVAYTAQARRVVLHTGALWVQTARDAAARPFLVQAPQGTARALGTRFSVRIAGEATRVAVAEGAVELRPARGGAPVHVSAGMQATLTAGAAGPASARDALADGWTEGVLYAERMPLGEFTAELARYRPGLLRCAPEVAALPVSGAFQLADTDAALAALAASLPVRIELRTRWWVMIGPA*