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SCNpilot_expt_300_bf_scaffold_310_curated_91

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(100260..100625)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S13 n=4 Tax=Comamonadaceae RepID=RS13_ACIET similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 121.0
  • Bit_score: 247
  • Evalue 9.50e-63
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 121.0
  • Bit_score: 247
  • Evalue 3.00e-63
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 121.0
  • Bit_score: 247
  • Evalue 1.30e-62

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
ATGGCTCGTATTGCTGGTATCAACATCCCGCCCCATCAGCACACCGAGATCGGCCTGACGGCCATCTACGGGATTGGGCGCACCCGCGCTCGCAAGATTTGCGAGGCTTGCGGAATTGCTTATTCCAAGAAGGTCAAGGAATTGACCGACGCCGATCTGGAGAAGATCCGCGACCAGATCGCCCAGTTCACCATCGAAGGTGACCTGCGCCGTGAAACCACGATGAACATCAAGCGCCTGATGGACATCGGCTGCTATCGCGGTTTCCGTCATCGTCGCGGTCTGCCGATGCGCGGTCAGCGTACCCGCACCAATGCCCGTACCCGCAAGGGCCCGCGCAAGGGTGCAGCGGCACTGAAGAAGTAA
PROTEIN sequence
Length: 122
MARIAGINIPPHQHTEIGLTAIYGIGRTRARKICEACGIAYSKKVKELTDADLEKIRDQIAQFTIEGDLRRETTMNIKRLMDIGCYRGFRHRRGLPMRGQRTRTNARTRKGPRKGAAALKK*