ggKbase home page

SCNpilot_expt_300_bf_scaffold_310_curated_123

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(129443..129841)

Top 3 Functional Annotations

Value Algorithm Source
ABC branched chain amino acid transporter, inner membrane subunit n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TT32_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 52.3
  • Coverage: 128.0
  • Bit_score: 145
  • Evalue 4.20e-32
ABC branched chain amino acid transporter, inner membrane subunit {ECO:0000313|EMBL:EAQ04809.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola batsensis (strain ATCC BAA-863 / DSM 15984 / HTCC2597).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.3
  • Coverage: 128.0
  • Bit_score: 145
  • Evalue 6.00e-32
braD; branched chain amino acid ABC transporter inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 55.5
  • Coverage: 128.0
  • Bit_score: 142
  • Evalue 1.10e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Oceanicola batsensis → Oceanicola → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 399
ATGGATCACGTGCTGCATCGCACGGGCGTGGGCAAGCGGGTCCAGGCGGTGGCCATCGATCCGGCAATGGCTGCCTGGGTCGGCATCAACGTGAATGCCGTCTTCGTCTGGACGGGGGGCGCAGGCTTCGCACTCGCGGGATTGGCCGGCGGGCTGCTGTCGGTGAACCAGAGTCTGTCGCCAGAAATGGGCAGCGCGCTCATCATCCAGGCGTTCGGCGCCTTGATCGTGGGTGGGCTGGGCAACATCCGGGGGGCCTTCCTGGCTTCCGTTCTCCTGGGGCTGGTCACATCGTTCGGCGACCGTCTGGTTCCGGACGTGCCTGGCATGTTTTTCTTCGTGGCCTTGGCCGTGATCCTGCTGGTGCGCCCACAGGGCTTGATGAGGGGAATGCGATGA
PROTEIN sequence
Length: 133
MDHVLHRTGVGKRVQAVAIDPAMAAWVGINVNAVFVWTGGAGFALAGLAGGLLSVNQSLSPEMGSALIIQAFGALIVGGLGNIRGAFLASVLLGLVTSFGDRLVPDVPGMFFFVALAVILLVRPQGLMRGMR*