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SCNpilot_expt_300_bf_scaffold_354_curated_40

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(38251..39672)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase large subunit; K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 98.1
  • Coverage: 473.0
  • Bit_score: 930
  • Evalue 1.70e-268
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.1
  • Coverage: 473.0
  • Bit_score: 930
  • Evalue 7.80e-268
3-isopropylmalate dehydratase large subunit n=2 Tax=Alicycliphilus denitrificans RepID=E8TYG3_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 473.0
  • Bit_score: 930
  • Evalue 5.50e-268

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1422
ATGGGACGCACCCTGTACGACAAGATCTTCGACGAACACGTCGTCCACACCGAGGAGGACGGCACCGCCGTGCTCTACATCGACCGCCACCTGGTGCACGAAGTGACCAGCCCGCAGGCCTTCGAGGGCCTGCGCGAGGCCGGCCGCAAGGTCTGGCGCGTGAGCTCCATCGTCGCCACGGCCGACCACAACACGCCCACCACGGGCTGGGAGCGCGGCTACGACGGCATTGCCGACCCCATCAGCAAGGAGCAGATCGTCACGCTGGACAAGAACATCGCCGAATCGGGCGCGGCCGCGTTCTTCCCCTTCCTCTCCAGGCGCCAGGGCATCGTGCACGTGATCGGCCCCGAGAACGGCGCCACCCTGCCTGGCATGACCGTGGTCTGCGGCGACAGCCACACCAGCACGCACGGCGCCTTCGGCGCGCTGGCCCACGGCATCGGCACCAGCGAGGTCGAGCACGTGATGGCCACGCAGACCCTGCTGGCCAAGAAGGCCAGGAACATGCTCATCAAGGTCAACGGCAAGGTGGCCCCCGGCATCACGGCCAAGGACATCGTGCTGACCATCATCGGCAGGATCGGCACCGCCGGCGGCACGGGCTACACCATCGAGTTCGCGGGCGAGGCCATCCGCGACCTGTCGATGGAAGGCCGCATGACCGTGTGCAACATGGCCATCGAGGCCGGCGCGCGCGCGGGCCTGGTGGCCGTGGACGACAAGACCATCGCCTACGTCAAGGGCCGCCCGCTGGCCCCCACGGGCGTGGAGTGGGACCAGGCCGTGCAGTACTGGAAGACGCTGCACTCCGACGCCGACGCGCAGTGGGACGCCGTGGTGGAGCTCAACGCCTTTGACATCGTTCCGCAGGTGACCTGGGGCACCAGCCCCGAGATGGTGCTGGGCGTGGACGCCACGGTGCCCGACCCCGACAAGGAAAAGGACCCCTCCAGGCGCGGCGCGGCCGAGCGCGCCCTGACCTACATGGGCCTCGAGCCCGGCAAGCCGATCGCCGACATCTTCGTGGACAAGGTGTTCATCGGCAGCTGCACCAACAGCCGCATCGAGGACATGCGCGAGGCCGCCGCCGTGGTCAGGAAGCTCGGCCAGAAGGTCGCCAGGAACGTCAAGCTGGCCATGGTCGTGCCCGGCTCGGGCCTGGTCAAGGAACAGGCCGAGCGCGAGGGCCTGGACCAGATCTTCAAGGCCGCCGGCTTCGAATGGCGCGAACCCGGCTGCTCCATGTGCCTGGCCATGAACGCCGACCGGCTGGAGCCCGGCGAGCGCTGCGCCAGCACCAGCAACCGCAACTTCGAAGGCCGCCAGGGCGCGGGCGGACGCACCCACCTGGTCAGCCCGGCCATGGCCGCGGCCGCCGCCATCCACGGCCATTTCGTCGACATCCGCAAGTTCGCCTAA
PROTEIN sequence
Length: 474
MGRTLYDKIFDEHVVHTEEDGTAVLYIDRHLVHEVTSPQAFEGLREAGRKVWRVSSIVATADHNTPTTGWERGYDGIADPISKEQIVTLDKNIAESGAAAFFPFLSRRQGIVHVIGPENGATLPGMTVVCGDSHTSTHGAFGALAHGIGTSEVEHVMATQTLLAKKARNMLIKVNGKVAPGITAKDIVLTIIGRIGTAGGTGYTIEFAGEAIRDLSMEGRMTVCNMAIEAGARAGLVAVDDKTIAYVKGRPLAPTGVEWDQAVQYWKTLHSDADAQWDAVVELNAFDIVPQVTWGTSPEMVLGVDATVPDPDKEKDPSRRGAAERALTYMGLEPGKPIADIFVDKVFIGSCTNSRIEDMREAAAVVRKLGQKVARNVKLAMVVPGSGLVKEQAEREGLDQIFKAAGFEWREPGCSMCLAMNADRLEPGERCASTSNRNFEGRQGAGGRTHLVSPAMAAAAAIHGHFVDIRKFA*