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SCNpilot_expt_300_bf_scaffold_424_curated_16

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(17531..18421)

Top 3 Functional Annotations

Value Algorithm Source
LysR-family transcriptional regulator n=3 Tax=Bordetella bronchiseptica RepID=K4QL73_BORBO similarity UNIREF
DB: UNIREF100
  • Identity: 75.1
  • Coverage: 293.0
  • Bit_score: 443
  • Evalue 1.70e-121
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 75.1
  • Coverage: 293.0
  • Bit_score: 443
  • Evalue 5.30e-122
  • rbh
LysR substrate-binding domain protein {ECO:0000313|EMBL:ETH91272.1}; TaxID=1331279 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis STO1-CHOC-0019.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.8
  • Coverage: 294.0
  • Bit_score: 443
  • Evalue 2.40e-121

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Taxonomy

Bordetella pertussis → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 891
ATGAACATGAAGGAACTGCGGCACTTTTGCGCCGTTGCTTCGGAACTGAATTTCCGGCGTGCCGCAGAGCAGCTGCATATCGCCCAACCGGCGCTCTCTGTCTCCATCGCGCGGTTTGAAGAGCGCATGGGCGTCGCCCTGTTCGTGCGCGGCCGTCGTGGCGTCATGCTGACGGAAGCGGGCAAGGTTCTTCTGCCTGAAGCCGTGCAGATACTGCGGCGTTCGGAGCGGCTGCGATCGCTGGCCGCAGAGGCAGACAGCGGCGATGTGGGCATCCTGCGGCTGGCGTTCGTCGGCTCGGCGCCTTATCGCCTGCTGCCCAGGGCCCTGCCGAGGCTGCAGCGCAGCCATCCGGGCATCCTGCTGGAACTCTACGAAGCGACGACCGACCGCATCATTGAAGGGCTGCACAGCCGCAAGTTCGACCTGGGCGTCGTACGCTATCCGATGGACGCGTTTCCCGGGTTGAAGATGGAGGTGGTGGACGAGGACGGCTATTGCGTCGCACTGCCGTCAGGCCATCCACTGGCCGTTCGGGAAGATCTGTCCCTGAGAGAGCTGGCCGACGAGCCGCTCCTGGTGCCGCCGAGAGAGCATTCGCCTGCGCTGCGCGCGATGATGCTGCAGGCCTTCCAGGCGCAGGGCATCATGCCGCGCATCGCCAACCATCAGGCGACCCAGCCTGCGACAGTGCTGGCTCTTGTGGAGATGGGCGCTGGCATTGCGCTCGTGCCTTCGCCCCTCGTGAGCCGCGTCGGGTATCGCGTTGTGTTCCTTCCTCTTGCGCCGGACTCTCGGTTCGACAGCGGTCTGGCCCTGTTGTCCGACCCGACGTACCGCACAGCACATGCCGATCACTTTCGCCAGGCGCTTCGGAATGGCGCTACCTAG
PROTEIN sequence
Length: 297
MNMKELRHFCAVASELNFRRAAEQLHIAQPALSVSIARFEERMGVALFVRGRRGVMLTEAGKVLLPEAVQILRRSERLRSLAAEADSGDVGILRLAFVGSAPYRLLPRALPRLQRSHPGILLELYEATTDRIIEGLHSRKFDLGVVRYPMDAFPGLKMEVVDEDGYCVALPSGHPLAVREDLSLRELADEPLLVPPREHSPALRAMMLQAFQAQGIMPRIANHQATQPATVLALVEMGAGIALVPSPLVSRVGYRVVFLPLAPDSRFDSGLALLSDPTYRTAHADHFRQALRNGAT*