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SCNpilot_expt_300_bf_scaffold_256_curated_27

Organism: scnpilot_dereplicated_Nitrosospira_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 24366..26231

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein; K15461 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 613.0
  • Bit_score: 716
  • Evalue 6.80e-204
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKU9_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 68.1
  • Coverage: 614.0
  • Bit_score: 836
  • Evalue 1.90e-239
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000256|HAMAP-Rule:MF_01102, ECO:0000256|SAAS:SAAS00084295}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein {ECO:0000256|HAMAP-Rule:MF_01102};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.1
  • Coverage: 614.0
  • Bit_score: 836
  • Evalue 2.60e-239

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1866
ATGCTGAATTTTCGCGCAGACATCGAGTGGGTGAACGGGCAACCGTTTTCGCGCCGCTACGGCGATATCTATTTCTCGAGAGAGGGAGGGCTGGCGGAGAAACGCCACGTCTTTTTGGATGGCAATAACCTTCGGGAACGTTTTGCCTCACTGGGGTGCAGGCAGACATTCACCATAGGCGAGACAGGCTTTGGCATAGGCCTTAATTTCCTGTGCGCACGACAATTATTCGAAGAAACCGCCAACGCAGGCAGTAGCCTCGACTATTTCAGCGTGGAGAAATACCCGCTGGATGAGCGCGAACTGGAACAGGCGCTCGCGCCATGGCCGGAATTTCGACGATACGCAGTGGAATTGATCCAGCGCTGGCGTCGCCGTGTCCCTGGCTGGAACCGGTGGAGTTTTGCGAATGGCCGTGTCCGGCTCACGCTGGTGATCGACGATGCGCTGACGGCGTTGCCCGAAGCTTCCGCGTCTGTCGATGCCTGGTTTCTCGACGGATTTGCCCCCTCGCATAATCCTGAGCTCTGGACGCAACCCGTGTGCGAGAGCATCGTATCCGCCTCGAGGTCCGGCACCACTTTTTCCACCTACACCTGTACCGGCTGGGTGCGGCGCAGCCTGGAAAAGGCCGGTTTCCAGGTCGACAAGGTTCCGGGCTTCGGCCGCAAACGCGAAATGCTCCGGGGATGTCTGCCTGGGGCAGCGAATCCCTCATCGCCTCCGGCGACAGCCATTGTAATCGGCGCGGGCCTCGCGGGTTGCAGCGTGGCTTCCGCCCTGGCGGCCCGCGGCGTTGCCGTATCGCTCATCGAGCAGGCGCCGCGCCTTGCGGCCGCCGCCTCCGGAAATTCCCTGGGCATCCTCCATGCCCGCCTGAGTGCGGGAATGAGCCCGCTGCAGCGCTTCGTTCTTGCCTCGTACGGATATGCTCTTGCCTTGCTCGACGAAAAGCTGCCCGTGGACGGAATTGCACGCGCGGAATGCGGAGAATTGCAGCTTGCCTTCTCGGATGACGAAACCAAGCGTATCGACAAACTGGCAGCGCTTGATTGGCCCCCGCACATCTTGCAACATGTCGGGCCGGCAGACGCATCGAACCTGGCTGGCCTAAAGCTCGCACATGGCGGCTTGTGGTTCCCTGCAGGAGGATGGGTCGTACCGGCAAGCGTGTGCGAAGTACTAGCGGCTGATCCCCGGATCACGCAACGGCTGGGCTGCAGCGCAGATTCGCTGGCCTGGAAAAAAGATACCGATGCAGGATGGCATGTGGCAGGCCAGGATCAGAATGGACAATCCTGGGAGCAAGCCGCTCAGATAGTGGCGGTTTGCACAAGTTACCAGGTGAAGAACTTCAAACCGCTGGCAGACTTTCCGCTGACGCCGGTCAGGGGACAGATTACCGCGCTGCCCGTCACGCCACCCAGCAAAAATTTGCGCACTATTGTGAGCGCTCGCGCTTACCTGTCTCCCGGGGTTGCGGGCACACATGTGGCCGGCGCCACGCATGGCTTCAACGATGTGTCGCTCGAACTGCGAACCTGCGATCACCTGGAAAACCTGCACAAGCTCTCCGAAATCTCTCCGGCCCTCGTGAAGGCATGGGATAACGATACGCTCCATCCCGCCCGGCTCGGAGGCCGCGCATCGGTGCGTGCCTCGCTTCCGGGCGCTATGCCGCTGGCCGGCGAATTTCTCCCCGGGTTATTTACGAGTCTGGGGCACGGCACGCGCGGCCTGCTGACCGCCGGGCTCTGCGGAGAATTGATCGCAGCAGCAGCTTGCAAGCAACTGCTCCCCCTGCCGGGGGCGTTGTCCAGAGCGCTGAATCCGGCTGTGCGGCACGCAAGCCGCACCGCTCGCTGA
PROTEIN sequence
Length: 622
MLNFRADIEWVNGQPFSRRYGDIYFSREGGLAEKRHVFLDGNNLRERFASLGCRQTFTIGETGFGIGLNFLCARQLFEETANAGSSLDYFSVEKYPLDERELEQALAPWPEFRRYAVELIQRWRRRVPGWNRWSFANGRVRLTLVIDDALTALPEASASVDAWFLDGFAPSHNPELWTQPVCESIVSASRSGTTFSTYTCTGWVRRSLEKAGFQVDKVPGFGRKREMLRGCLPGAANPSSPPATAIVIGAGLAGCSVASALAARGVAVSLIEQAPRLAAAASGNSLGILHARLSAGMSPLQRFVLASYGYALALLDEKLPVDGIARAECGELQLAFSDDETKRIDKLAALDWPPHILQHVGPADASNLAGLKLAHGGLWFPAGGWVVPASVCEVLAADPRITQRLGCSADSLAWKKDTDAGWHVAGQDQNGQSWEQAAQIVAVCTSYQVKNFKPLADFPLTPVRGQITALPVTPPSKNLRTIVSARAYLSPGVAGTHVAGATHGFNDVSLELRTCDHLENLHKLSEISPALVKAWDNDTLHPARLGGRASVRASLPGAMPLAGEFLPGLFTSLGHGTRGLLTAGLCGELIAAAACKQLLPLPGALSRALNPAVRHASRTAR*