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SCNpilot_expt_300_bf_scaffold_165_curated_13

Organism: scnpilot_dereplicated_Nitrosospira_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(20632..21750)

Top 3 Functional Annotations

Value Algorithm Source
ABC transport system, permease component YbhR n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJI6_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 80.4
  • Coverage: 372.0
  • Bit_score: 588
  • Evalue 4.10e-165
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.4
  • Coverage: 372.0
  • Bit_score: 592
  • Evalue 4.00e-166
putative ABC-2 type transporter, permease protein similarity KEGG
DB: KEGG
  • Identity: 72.6
  • Coverage: 372.0
  • Bit_score: 549
  • Evalue 8.60e-154

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1119
GTGCTCGATTTCCTGCGCCGCATTGCCAGCCTGTGCCGTAAAGAACTGCTCGCCATCTTCAAGGATCCGGCCAATCGGGTAATCCTCATCGTTCCCTCCCTGGTCGAAAGCTTCCTGTTCGGTTATGCCGCGACTTACGACCTGACGAACGTGCCCTATGCCCTGCTGGACCAGAGCGGGGGAATCCATGCGGCCGAGCTCGTAGCCCGCCTGGATGGAAGCGGGGTGTTCCATCGCGCCGCCACCCTGCGGACCCAGAAGGAGATTGCGGATGTGATCGATGCGGGAAAGGCCCTGGTCGTGGTCCAGATCGGGCAGCGATTCGAGCAGCAATTGAATGAAGGCGGGATGGCGCCGGTACAACTGATCCTGGATGCGCGCAACTCCAATACCGCGGGATCCGCCGCGGCCTATATCGGCGGCATCATCGAAGGGTATAACGCCACGCTGCAGAGCGGCGCGGCGCCGCCCTTGCCGCAGATCACCGTCGAATCGCGCGCCTGGTACAATCCCAACCTCGAAACCCGCTGGAACCTGCTGCCCGGGTTGATCGCCTCGCTCAGCATGATCCAGACGCTGATGCTGTCTGCCTTGTCGGTCGCGCGCGAACGCGAAAACGGCACTTTCGATCAACTGCTGGTGACGCCGTTTTCTCCGATGGAAGTGATGATAGGCAAAGCCATCCCATCCATCATGATCGGCCTGACGCAATCGACCATCGTCATGATGGTCGCGCTATTCTGGTTCAGGATACCCATGGCAGGGTCGCTCGTCACGCTCTATACCGGGCTGACCCTGTTTACCGTGGCCAGCGTGGGGCTGGGGCTGTCGATCTCGGCGGTTTCGGCAAACATGCAGCAGGCCATGCTGTACACTTTCATGCTGATCATGCCACTGATCCTGCTCTCGGGACTGGCCACCCCGGTTCGCAACATGCCTGAATTCCTGCAGATCGCCACCCTGATCAATCCGCTGCGCTTTGCCATCGACCTGGTGCAGCGCGTCTATCTGGAGGGAGTGGGGCTGCTTACGGTCATCCACGACCTGATTCCCCTGCTGATCATTTCGGCGATCACTCTGCCGCTGGCGGCCTGGCTGTTTCGCCATCGCCTTCTTTAG
PROTEIN sequence
Length: 373
VLDFLRRIASLCRKELLAIFKDPANRVILIVPSLVESFLFGYAATYDLTNVPYALLDQSGGIHAAELVARLDGSGVFHRAATLRTQKEIADVIDAGKALVVVQIGQRFEQQLNEGGMAPVQLILDARNSNTAGSAAAYIGGIIEGYNATLQSGAAPPLPQITVESRAWYNPNLETRWNLLPGLIASLSMIQTLMLSALSVARERENGTFDQLLVTPFSPMEVMIGKAIPSIMIGLTQSTIVMMVALFWFRIPMAGSLVTLYTGLTLFTVASVGLGLSISAVSANMQQAMLYTFMLIMPLILLSGLATPVRNMPEFLQIATLINPLRFAIDLVQRVYLEGVGLLTVIHDLIPLLIISAITLPLAAWLFRHRLL*