ggKbase home page

SCNpilot_expt_500_bf_scaffold_3894

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_3894_1
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(146..640)
DNA (495bp) protein (165aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
lipoprotein signal peptidase; K03101 signal peptidase II [EC:3.4.23.36]
Lipoprotein signal peptidase n=2 Tax=Delftia acidovorans RepID=A9BR68_DELAS
SCNpilot_expt_500_bf_scaffold_3894_2
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(630..1586)
DNA (957bp) protein (319aa)
heavy metal translocating P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]
Heavy metal translocating P-type ATPase n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WTS9_COMTE
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EED67485.1}; Flags: Precursor;; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
SCNpilot_expt_500_bf_scaffold_3894_3
unknown

Not on your lists

2272..2607
DNA (336bp) protein (112aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3894_4
unknown

Not on your lists

2604..2912
DNA (309bp) protein (103aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3894_5
unknown

Not on your lists

2878..3600
DNA (723bp) protein (241aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3894_6
Deinococcus geothermalis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(3699..4253)
DNA (555bp) protein (185aa)
cation transporter n=1 Tax=Deinococcus wulumuqiensis RepID=UPI00034BDCE2 rbh
cation efflux protein
Cation efflux protein {ECO:0000313|EMBL:ABF44016.1}; TaxID=319795 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus geothermalis (strain DSM 11300).;"
SCNpilot_expt_500_bf_scaffold_3894_7
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4555..7128
DNA (2574bp) protein (858aa)
Uncharacterized protein n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RTX0_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EFV96206.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
cytochrome c biogenesis protein transmembrane region
SCNpilot_expt_500_bf_scaffold_3894_8
unknown

Not on your lists

comp(7214..7303)
DNA (90bp) protein (30aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3894_9
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7300..8184)
DNA (885bp) protein (295aa)
hydroxyacylglutathione hydrolase (EC:3.1.2.6) rbh
Hydroxyacylglutathione hydrolase {ECO:0000313|EMBL:AEI82484.1}; EC=3.1.2.6 {ECO:0000313|EMBL:AEI82484.1};; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia; eutropha).;"
beta-lactamase n=1 Tax=Caldimonas manganoxidans RepID=UPI00036FA3CA rbh
SCNpilot_expt_500_bf_scaffold_3894_10
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8748..9218
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00037437FE
transcriptional regulator
MerR family transcriptional regulator {ECO:0000313|EMBL:ENO76256.1}; TaxID=305700 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 27.;"
SCNpilot_expt_500_bf_scaffold_3894_11
Burkholderia phymatum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10253..10537
DNA (285bp) protein (95aa)
Transposase, putative n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JW64_BURP8
transposase
Transposase, putative {ECO:0000313|EMBL:ACC75191.1}; TaxID=391038 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phymatum (strain DSM 17167 / STM815).;"
SCNpilot_expt_500_bf_scaffold_3894_12
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10732..11256)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FCY5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV15087.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3894_13
Pantoea sp. PSNIH2, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11716..12516
DNA (801bp) protein (267aa)
Transcriptional regulator, LysR family n=15 Tax=Proteobacteria RepID=C6BDK0_RALP1
LysR family transcriptional regulator
D-alanyl-D-alanine endopeptidase {ECO:0000313|EMBL:AIX73530.1}; TaxID=1484157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. PSNIH2.;"
SCNpilot_expt_500_bf_scaffold_3894_14
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13115..13876
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000366BF0A rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV00455.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_expt_500_bf_scaffold_3894_15
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14000..14221
DNA (222bp) protein (74aa)
Uncharacterized protein n=5 Tax=Pseudomonas aeruginosa RepID=U8BTW2_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:CEI17291.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
phage transcriptional regulator, AlpA; K07733 prophage regulatory protein
SCNpilot_expt_500_bf_scaffold_3894_16
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14263..14472
DNA (210bp) protein (70aa)
Cobyrinic acid a,c-diamide synthase n=1 Tax=Pseudomonas aeruginosa DHS01 RepID=V4XDP2_PSEAI
cobyrinic acid ac-diamide synthase
Cobyrinic acid a,c-diamide synthase {ECO:0000313|EMBL:EIK52030.1}; TaxID=477228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri TS44.;"
SCNpilot_expt_500_bf_scaffold_3894_17
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14442..14930
DNA (489bp) protein (163aa)
Cobyrinic acid ac-diamide synthase n=1 Tax=Ralstonia sp. PBA RepID=I9W8L0_9RALS
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:EIZ04799.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
cobyrinic acid ac-diamide synthase; K12055 chromosome partitioning related protein ParA
Displaying 17 items

View Taxonomy