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SCNpilot_expt_500_bf_scaffold_2488

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_2488_1
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..1221)
DNA (1221bp) protein (407aa)
fibronectin, partial n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B313F1
Uncharacterized protein {ECO:0000313|EMBL:KJC64526.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
fibronectin type III domain-containing protein
SCNpilot_expt_500_bf_scaffold_2488_2
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1495..2334
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034D7E5A
Uncharacterized protein {ECO:0000313|EMBL:KJL36807.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
putative WD-repeat containing protein
SCNpilot_expt_500_bf_scaffold_2488_3
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2412..4124
DNA (1713bp) protein (571aa)
ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6B7_9MICO rbh
ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD {ECO:0000313|EMBL:EIC07714.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
ABC transporter; K16013 ATP-binding cassette, subfamily C, bacterial CydD
SCNpilot_expt_500_bf_scaffold_2488_4
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4121..5815
DNA (1695bp) protein (565aa)
Thiol reductant ABC exporter, CydC subunit n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AE77_9MICO
Thiol reductant ABC exporter, CydC subunit {ECO:0000313|EMBL:EPD84975.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
ABC transporter; K16012 ATP-binding cassette, subfamily C, bacterial CydC
SCNpilot_expt_500_bf_scaffold_2488_5
Gordonia amarae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5812..6360
DNA (549bp) protein (183aa)
GNAT family acetyltransferase (EC:2.3.-.-)
Putative uncharacterized protein n=1 Tax=Gordonia amarae NBRC 15530 RepID=G7GM84_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:GAB04709.1}; TaxID=1075090 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia amarae NBRC 15530.;"
SCNpilot_expt_500_bf_scaffold_2488_6
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6353..6859)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AS48_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84962.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
putative acetyltransferase
SCNpilot_expt_500_bf_scaffold_2488_7
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6962..8536)
DNA (1575bp) protein (525aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6D3_9MICO rbh
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:EIC07730.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
nucleoside-diphosphate-sugar epimerase
SCNpilot_expt_500_bf_scaffold_2488_8
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8569..8805)
DNA (237bp) protein (79aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6D5_9MICO
Phospholipid phosphatase {ECO:0000313|EMBL:KIC59915.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
membrane-associated phospholipid phosphatase
SCNpilot_expt_500_bf_scaffold_2488_9
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9314..10639)
DNA (1326bp) protein (442aa)
major facilitator transporter n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036B32DE
Drug resistance transporter, Bcr/CflA subfamily {ECO:0000313|EMBL:EIC07733.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
permease of the major facilitator superfamily; K07552 MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein
SCNpilot_expt_500_bf_scaffold_2488_10
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11206..11499
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AS44_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC59914.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2488_11
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11496..12131
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6D8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC59913.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2488_12
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12136..14976)
DNA (2841bp) protein (947aa)
cation transport ATPase; K01552 [EC:3.6.3.-]
HAD ATPase, P-type, family IC n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B8K9_9MICO
Cation-transporting ATPase {ECO:0000313|EMBL:EXJ50854.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
SCNpilot_expt_500_bf_scaffold_2488_13
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15106..15996)
DNA (891bp) protein (297aa)
ABC-type transporter, integral membrane subunit n=2 Tax=Microbacterium RepID=H8E6E1_9MICO
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:EIC07738.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
sugar ABC transporter permease; K10234 alpha-glucoside transport system permease protein
SCNpilot_expt_500_bf_scaffold_2488_14
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16027..17367)
DNA (1341bp) protein (447aa)
ABC transporter permease n=1 Tax=Microbacterium sp. B19 RepID=UPI000347BF5F
ABC transporter permease {ECO:0000313|EMBL:KIC59910.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
sugar ABC transporter permease; K10233 alpha-glucoside transport system permease protein
SCNpilot_expt_500_bf_scaffold_2488_15
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17450..18781)
DNA (1332bp) protein (444aa)
Alpha-glucoside transport system substrate-binding protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A8W1_9MICO rbh
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIC59909.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
sugar ABC transporter periplasmic protein; K10232 alpha-glucoside transport system substrate-binding protein
SCNpilot_expt_500_bf_scaffold_2488_16
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19011..20033
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AE54_9MICO rbh
Transcriptional regulator {ECO:0000313|EMBL:KIC59908.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
transcriptional regulator
SCNpilot_expt_500_bf_scaffold_2488_17
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(20085..20378)
DNA (294bp) protein (98aa)
50S ribosomal protein L7/L12 n=2 Tax=Bifidobacterium longum RepID=RL7_BIFLS
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12
SCNpilot_expt_500_bf_scaffold_2488_18
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(20446..20934)
DNA (489bp) protein (163aa)
50S ribosomal protein L10 n=2 Tax=Microbacterium RepID=H8E6E6_9MICO rbh
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
rplJ; ribosomal protein L10; K02864 large subunit ribosomal protein L10
SCNpilot_expt_500_bf_scaffold_2488_19
Streptomyces turgidiscabies, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21293..21649
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Streptomyces turgidiscabies Car8 RepID=L7FDT4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ELP68820.1}; TaxID=698760 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces turgidiscabies Car8.;"
SCNpilot_expt_500_bf_scaffold_2488_20
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21646..22821
DNA (1176bp) protein (392aa)
Chromosome segregation ATPases n=1 Tax=Microbacterium sp. TS-1 RepID=U2XRW3_9MICO
Chromosome segregation ATPases {ECO:0000313|EMBL:GAD35735.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
Integral membrane protein
SCNpilot_expt_500_bf_scaffold_2488_21
Georgenia sp. SUBG003, Georgenia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22808..23473
DNA (666bp) protein (222aa)
Uncharacterized protein {ECO:0000313|EMBL:KEP22570.1}; TaxID=1497974 species="Bacteria; Actinobacteria; Micrococcales; Bogoriellaceae; Georgenia.;" source="Georgenia sp. SUBG003.;"
SCNpilot_expt_500_bf_scaffold_2488_22
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23478..24131
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2YZ49_9MICO
Uncharacterized protein {ECO:0000313|EMBL:GAD35733.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
SCNpilot_expt_500_bf_scaffold_2488_23
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24196..24864
DNA (669bp) protein (223aa)
YqaJ recombinase family protein n=2 Tax=Microbacterium RepID=H8E6E7_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD84947.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
membrane carboxypeptidase
SCNpilot_expt_500_bf_scaffold_2488_24
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24993..26663
DNA (1671bp) protein (557aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6E8_9MICO
Major facilitator transporter {ECO:0000313|EMBL:EXJ50862.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
drug resistance transporter, EmrB/QacA subfamily
SCNpilot_expt_500_bf_scaffold_2488_25
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26674..27132
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003164ACB
MarR family protein {ECO:0000313|EMBL:KJL20688.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
transcriptional regulator
SCNpilot_expt_500_bf_scaffold_2488_26
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27246..28277
DNA (1032bp) protein (344aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6F0_9MICO rbh
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:EIC07747.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
NADPH:quinone reductase
SCNpilot_expt_500_bf_scaffold_2488_27
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28280..29161)
DNA (882bp) protein (294aa)
Transcriptional regulator, ArgP family n=2 Tax=Microbacterium RepID=H8E6F1_9MICO
LysR family transcriptional regulator {ECO:0000313|EMBL:EXJ50865.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
transcriptional regulator; K05596 LysR family transcriptional regulator, chromosome initiation inhibitor
SCNpilot_expt_500_bf_scaffold_2488_28
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29233..29919
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002F3AF2C
Amino acid transporter {ECO:0000313|EMBL:KEP74800.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
lysine efflux permease; K06895 L-lysine exporter family protein LysE/ArgO
SCNpilot_expt_500_bf_scaffold_2488_29
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29932..30270)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002EF5170
Uncharacterized protein {ECO:0000313|EMBL:KJL29712.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2488_30
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30316..30591
DNA (276bp) protein (92aa)
Acylphosphatase {ECO:0000256|RuleBase:RU000553}; EC=3.6.1.7 {ECO:0000256|RuleBase:RU000553};; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
acylphosphatase; K01512 acylphosphatase [EC:3.6.1.7]
hypothetical protein n=1 Tax=Microbacterium RepID=UPI00036EA6C1
Displaying items 1-30 of 31 in total

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