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SCNpilot_expt_500_bf_scaffold_3842_9

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: 8957..9211

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans similarity UNIPROT
DB: UniProtKB
  • Identity: 96.4
  • Coverage: 84.0
  • Bit_score: 164
  • Evalue 6.10e-38
rpoZ; DNA-directed RNA polymerase, subunit K/omega; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 92.9
  • Coverage: 84.0
  • Bit_score: 160
  • Evalue 3.30e-37
DNA-directed RNA polymerase subunit omega n=2 Tax=Microbacterium RepID=H8E9X0_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 96.4
  • Coverage: 84.0
  • Bit_score: 164
  • Evalue 4.30e-38

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Taxonomy

Microbacterium laevaniformans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 255
ATGGCCGCTCGCGACAAGGGCATCATCGACCCGCCCATCGACGCACTGCTCGAGAAGGTCGACTCGAAGTACCAGCTGGTGATCTACGCGTCCAAGCGCGCCCGCCAGATCAACGACTACTACTCCGACCTGCACGAAGGGAATCTCTTCGACAACGTCGGTCCGCTCGTCGACTCGAGCGTCGAGGACAAGCCGCTGACCATCGCGCTGCACGAGATCCACGAGGACAAGCTGCGCCTGCGCCACGCCGAGTGA
PROTEIN sequence
Length: 85
MAARDKGIIDPPIDALLEKVDSKYQLVIYASKRARQINDYYSDLHEGNLFDNVGPLVDSSVEDKPLTIALHEIHEDKLRLRHAE*