ggKbase home page

SCNpilot_expt_500_bf_scaffold_5328_1

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: 3..248

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.1
  • Coverage: 81.0
  • Bit_score: 148
  • Evalue 5.70e-33
rpoC; DNA-directed RNA polymerase, beta' subunit/160 kD subunit; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 90.2
  • Coverage: 82.0
  • Bit_score: 147
  • Evalue 1.70e-33
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035C65CB similarity UNIREF
DB: UNIREF100
  • Identity: 91.4
  • Coverage: 81.0
  • Bit_score: 153
  • Evalue 7.40e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium sp. TS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 246
GCCATGGAGGGCAAGAGCGACCCGCTCGTCGGCCTCAAGGAGAACGTCATCATCGGAAAGCTCATCCCCGCCGGAACGGGACTCTCGAAGTACCGCGGAGTCACGGTCGAGGCGACGGAGGAGGCCAAGAGCGAGCGGTACCCCAACCGCATCTTCGCCTCGGACGGCGCCTACTCGGACGCCGACCTGAGCTACGTCGACTTCGACAGCTTCTCGAGCGACGGTTTCTCGAGCGAGTACAACTAA
PROTEIN sequence
Length: 82
AMEGKSDPLVGLKENVIIGKLIPAGTGLSKYRGVTVEATEEAKSERYPNRIFASDGAYSDADLSYVDFDSFSSDGFSSEYN*