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SCNpilot_expt_500_bf_scaffold_7888_4

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: comp(2559..3359)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=2 Tax=Flavobacterium RepID=A5FFK1_FLAJ1 similarity UNIREF
DB: UNIREF100
  • Identity: 80.1
  • Coverage: 266.0
  • Bit_score: 431
  • Evalue 4.60e-118
  • rbh
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 80.1
  • Coverage: 266.0
  • Bit_score: 431
  • Evalue 1.40e-118
  • rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ABQ06013.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.1
  • Coverage: 266.0
  • Bit_score: 431
  • Evalue 6.40e-118

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Taxonomy

Flavobacterium johnsoniae → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 801
TTGAAAAAAAACATATCCATAAAAAACAAAATTGAAGCGGCAGCATTATTAAAAATTGCACCGTTCAGAAAAGAAATTCGCAAGACCGAGCCACACAAGCACAGCAGTTATTTTGAAATCATTTATCTACAGAAAGGAAAAGGTTTTCATACCATCGACCATACTTCATTTTCAATAAAACCACCAACACTATTTTTTGTTCGCAAAGAACAAGTTCATCACTGGGATATTGCTGATGTCCCTGAGGGATATGTTCTGATTTTAAAGAAAGGCTTTGTTGAAAAATCGTTGGATGGCGGGCTGAAAAATCTTCTATCCAAGTTAAGCGGATTTAATTGTATTCATTTGAAAGAAATCCAGGGTATTGATACATTATTCAAACTGCTTATCACGGAAAAGAATTTTATTGTATTAGAAGGATTATTGAAAGCATTGTTTGCGAAAACATTGGATGCTGCAAAACCCTTGCCTGTTCAGACCAACAAAACGGATGATACAATAGTATCATTCAGGGAATTACTAAACCAGACAAGCGACTTACATAACAGTGTTGCCCATTACGCAGAAAAGCTCCATACAACACCACAAAACCTAAATGCCATTTGTCGTAAAACACTTAATCAGTCGGCAGCAGAAGTGATTGCCGAGCACATCATTAGCGAAGCAAAAAGACAACTGATTTATACAGACAACAGTGTTTCTGAAATCGCTTATAGTTTGAATTTTAACGACACTTCCCATTTTGTGAAATATTTCAAACGTCACACAGGCGTTACCCCGTTTTTATTCCGTAATACTTAA
PROTEIN sequence
Length: 267
LKKNISIKNKIEAAALLKIAPFRKEIRKTEPHKHSSYFEIIYLQKGKGFHTIDHTSFSIKPPTLFFVRKEQVHHWDIADVPEGYVLILKKGFVEKSLDGGLKNLLSKLSGFNCIHLKEIQGIDTLFKLLITEKNFIVLEGLLKALFAKTLDAAKPLPVQTNKTDDTIVSFRELLNQTSDLHNSVAHYAEKLHTTPQNLNAICRKTLNQSAAEVIAEHIISEAKRQLIYTDNSVSEIAYSLNFNDTSHFVKYFKRHTGVTPFLFRNT*