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SCNpilot_expt_500_bf_scaffold_9725_3

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: 827..1471

Top 3 Functional Annotations

Value Algorithm Source
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G8V0_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 49.1
  • Coverage: 173.0
  • Bit_score: 152
  • Evalue 4.30e-34
ECF family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 49.1
  • Coverage: 173.0
  • Bit_score: 152
  • Evalue 1.40e-34
ECF-family RNA polymerase sigma factor {ECO:0000313|EMBL:CAN99073.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.1
  • Coverage: 173.0
  • Bit_score: 152
  • Evalue 6.00e-34

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Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
ATGCGTGACGATTTTGGGATCGCTCGAGCCCCCATCCGGCATAGCGCGCACAAGGTCGTGATGTTCGCGGTACGTGCTGCAGATCTGACGGCAGACGACAAGCGGGAGGCTCCCGCGGTGCGCACGCTCGACCCGCGCCTACAAGCGCTCGCGCTCGAGCATTACGACTTCGTCTGGCGCTCGCTTCGTCGCCTGGGCATCACGCCCCCCGAAACCGACGACGCCACCCAGCAGGTCTTCCTGACGCTGTCTCTCAAGCTCTCGAGCGTGAGGGAGGGCGAAGAGCGCAGCTACATCTTCGGCATCGTCATGCGCGTGGCCGCGCGCGTACGGCGTAATTATGCAACCGCGCGCAAACGAGAAGTGTCGGAGGGCGACGCGCCGGAGTCGCTCTCCCCGAGCCCGACCGCGGAGACGTCGCTCAGCCGCGCGCAAGCGCGTGCCATGATCGACGACATCCTCGCGAAGATGTCGGAAGAGCGGCGGATCGTCTTCGTGCTCTTCGAGCTGGAAGAGCTTTCTCAGCCCGAGATAGCAGAGCTTCTCGACGTTCCGATCGGAACCGTGGCCTCCCGTCTCCGGCGAGCGCGCGAAGACTTTGAAGCGGCGGTCGCGCGAATTCGCGCGAAAAGGCAGGGAGTCTAG
PROTEIN sequence
Length: 215
MRDDFGIARAPIRHSAHKVVMFAVRAADLTADDKREAPAVRTLDPRLQALALEHYDFVWRSLRRLGITPPETDDATQQVFLTLSLKLSSVREGEERSYIFGIVMRVAARVRRNYATARKREVSEGDAPESLSPSPTAETSLSRAQARAMIDDILAKMSEERRIVFVLFELEELSQPEIAELLDVPIGTVASRLRRAREDFEAAVARIRAKRQGV*