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SCNpilot_expt_500_bf_scaffold_12010_7

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: 3431..3940

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: low-density lipoprotein receptor n=1 Tax=Jaculus jaculus RepID=UPI0003331224 similarity UNIREF
DB: UNIREF100
  • Identity: 45.4
  • Coverage: 97.0
  • Bit_score: 78
  • Evalue 8.10e-12
Vitellogenin receptor {ECO:0000313|EMBL:AJP60220.1}; TaxID=159736 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Caridea; Palaemonoidea; Palaemonidae; Macrobrachium.;" source="Macrobrachium nipponense (Oriental river shrimp) (Palaemon; nipponensis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.9
  • Coverage: 115.0
  • Bit_score: 80
  • Evalue 2.30e-12
LDLR; low density lipoprotein receptor; K12473 low-density lipoprotein receptor similarity KEGG
DB: KEGG
  • Identity: 39.1
  • Coverage: 138.0
  • Bit_score: 79
  • Evalue 1.50e-12

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Taxonomy

Macrobrachium nipponense → Macrobrachium → Decapoda → Eumalacostraca → Arthropoda → Metazoa

Sequences

DNA sequence
Length: 510
ATGATTTGTTTTTGTTTTATCATAGATTTTGGACCAAATTGTGAATTTTCTTTCAAGGATGAAATTGAAACTGGATTCATAATTGAAAGACTAATTGATCTTCTTATTGAAGCTCGTACTACAACAGAACATGAGGTGATTCCATCAGCCTGTTATATTCTTCACGGTGAAACATGTTCACTTAATTCAAACACAAAAGAATGTCTCGAATGGCGTGATATTTGTGATAATGAACTTGATTGTATCAATGGGGAAGATGAACGACGTTGTTGGGAATTAGATATGAATTCATGTAATTTAGAAATCGAATTTCGATGTCGAAATGGACTCTGTATTTCGCGAGAGTTTTTATTCGATGGAGATTTCGATTGTATGGATGGAAGTGATGAACGACTTTCATTTCCCGATGATCTATGCTATGAAGCGATGCAGTTTGATTGTGAAGAACACATCTGTCCATCAAATTTAGTTTCTTGTTTGGATGGACAATGCATTGATCCAACGAAATTT
PROTEIN sequence
Length: 170
MICFCFIIDFGPNCEFSFKDEIETGFIIERLIDLLIEARTTTEHEVIPSACYILHGETCSLNSNTKECLEWRDICDNELDCINGEDERRCWELDMNSCNLEIEFRCRNGLCISREFLFDGDFDCMDGSDERLSFPDDLCYEAMQFDCEEHICPSNLVSCLDGQCIDPTKF