ggKbase home page

SCNpilot_expt_500_bf_scaffold_12540_7

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: comp(5010..5690)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Paenibacillus sp. JC66 RepID=UPI0002890553 similarity UNIREF
DB: UNIREF100
  • Identity: 36.5
  • Coverage: 192.0
  • Bit_score: 121
  • Evalue 1.50e-24
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 36.1
  • Coverage: 202.0
  • Bit_score: 115
  • Evalue 1.90e-23
Tax=RBG_16_Chloroflexi_63_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 40.7
  • Coverage: 182.0
  • Bit_score: 119
  • Evalue 4.60e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Chloroflexi_63_12_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 681
TTGCTAAACCTGAAAGGTTTTTCGCTAATTTCAAAAGAAGTGTCCGCCAGGCCGGATAAGAAAGGTGAACCAGCCTCGATTTCGCCTGGCCCGGTGGTTGCCGAGGAAAGCCTGGTGAAACTGGCCCGGTCGGGCGACGAGGCTGCCTTTGTCGCGCTGGTCGAAATGTACTGGGGTTCCATCCAGGTCTATTTGTTGCGGTTGGTGGGTGACGCCGAAGCCGCCGCCGACCTGACCCAGGAAACTTTCTACCGGGCCTACAAAGCGCTCTCGCGCTGGTCCGGCAACCGGGATTTACAGTTCAAGCCCTGGCTCTACAAAATCGCCACTAACCGGGCTATCACCTATTCCCAGGCCCGCAAACGCCGCCGCTGGCTTTCGCTCGACTTCCTCAAAGGACAGCCCGAAGATAGCGGACTAACCCCGGCCTGGCAGTTGGATGATTCGCCCGGCCCTATAGATTTCACGCTTGCCGCCGAAGCCAGCCGCCAGGTGGTCGCCACCCTGAACCGCCTACCAAAAGACCAGGCGGCGGTGCTGCTGTTGCGGTTTTATCACGACCTAAGTATTGAGGAAATCGGCCAGGTTTTAGGCTTGAATGCCAACGCCGTGAGGGCCCGCTTGCACCGGGCCCGGCTGGCCTTCCGGCGCAATTTTAAGGCGGAACAGGACGAAAATTAG
PROTEIN sequence
Length: 227
LLNLKGFSLISKEVSARPDKKGEPASISPGPVVAEESLVKLARSGDEAAFVALVEMYWGSIQVYLLRLVGDAEAAADLTQETFYRAYKALSRWSGNRDLQFKPWLYKIATNRAITYSQARKRRRWLSLDFLKGQPEDSGLTPAWQLDDSPGPIDFTLAAEASRQVVATLNRLPKDQAAVLLLRFYHDLSIEEIGQVLGLNANAVRARLHRARLAFRRNFKAEQDEN*