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SCNpilot_expt_500_bf_scaffold_25024_1

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: comp(3..215)

Top 3 Functional Annotations

Value Algorithm Source
Conjugative transfer signal peptidase TraF n=4 Tax=Pseudomonas aeruginosa RepID=U8EH46_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 71.0
  • Bit_score: 138
  • Evalue 2.80e-30
Peptidase {ECO:0000313|EMBL:AJG13750.1}; TaxID=70775 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas plecoglossicida.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 71.0
  • Bit_score: 144
  • Evalue 5.40e-32
traF; plasmid conjugal transfer transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 94.4
  • Coverage: 71.0
  • Bit_score: 136
  • Evalue 2.50e-30

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Taxonomy

Pseudomonas plecoglossicida → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 213
ATGACCGCCGTTTCCACTGCCGGCACCGCGCCGCGTCCTCGCTCGCGCCTGCGCGCTCGCCTCGTGCTGGCGGGCCTGTCCGCCTGCGGCCTGGCTGCGCTGGCCTGGGCGTCCTTCGTGCATCCGCTGCCGCGCTTGATCTACAACCCGTCCGACAGTGTGGCGGTCGGCTGGTATCGCGTCGATCCGCTGGGCCACGATACCGGCTCGCTG
PROTEIN sequence
Length: 71
MTAVSTAGTAPRPRSRLRARLVLAGLSACGLAALAWASFVHPLPRLIYNPSDSVAVGWYRVDPLGHDTGSL