ggKbase home page

SCNpilot_expt_500_bf_scaffold_26322_2

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: comp(784..1362)

Top 3 Functional Annotations

Value Algorithm Source
102.t00005; hypothetical protein; K10866 DNA repair protein RAD50 [EC:3.6.-.-] similarity KEGG
DB: KEGG
  • Identity: 22.9
  • Coverage: 205.0
  • Bit_score: 61
  • Evalue 3.70e-07
Putative uncharacterized protein n=1 Tax=Caenorhabditis brenneri RepID=G0N589_CAEBE similarity UNIREF
DB: UNIREF100
  • Identity: 26.5
  • Coverage: 185.0
  • Bit_score: 71
  • Evalue 8.60e-10
Putative uncharacterized protein {ECO:0000313|EMBL:EGT53014.1}; TaxID=135651 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.;" source="Caenorhabditis brenneri (Nematode worm).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 26.5
  • Coverage: 185.0
  • Bit_score: 71
  • Evalue 1.20e-09

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Caenorhabditis brenneri → Caenorhabditis → Rhabditida → Chromadorea → Nematoda → Metazoa

Sequences

DNA sequence
Length: 579
GAAACAATCGACACTAAGACGCCAGTACCATCAGCGAAGGAGAACGAGTTAAACAACGATAGCAAAGCGACAATGGCAGAAAAAGAGGATCGGTACATAACTACTCTGCACATGTTAACTGGTGCAATCGAATCCATAAATTCGCGATTGGACGATCAACATCACGAAAATGCGTTGCTCATAGAGAAGAAAATCAATCAAGTCGTTTCGAAAATTGACCAGAGCAAGTCAAAATTGCAAGATGAAAACAATGGATTGAGGGAGAAAAACATTCAATTACAAAACGAAAATAAAAAGTTGGGAACAGACAACAAAAAGATGAGCGTCGAAATCAGTAGCTTAAATAGCATTCAAGAACAGCTGAGGAAAAGTATTAGAGACCGTGACTTTGAAGTTGTCAAGTCAAAAGAGCTGACAGAGTCTTTAACGAAAGAAATTTCTAATTTGACACAAACTATATCTACTTTAAGGCAAGAAGTAACAAAGGCAAACCAAAGAATTGTTGATTTACAGAAACAGTTTGAGGAGAAAGAGGAAGTAAAACGCATTGAGGCCACAAAGAAAATAATAGGCAAGTAA
PROTEIN sequence
Length: 193
ETIDTKTPVPSAKENELNNDSKATMAEKEDRYITTLHMLTGAIESINSRLDDQHHENALLIEKKINQVVSKIDQSKSKLQDENNGLREKNIQLQNENKKLGTDNKKMSVEISSLNSIQEQLRKSIRDRDFEVVKSKELTESLTKEISNLTQTISTLRQEVTKANQRIVDLQKQFEEKEEVKRIEATKKIIGK*