ggKbase home page

SCNpilot_expt_500_bf_scaffold_25649_4

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: 3271..3678

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002378625 similarity UNIREF
DB: UNIREF100
  • Identity: 87.3
  • Coverage: 134.0
  • Bit_score: 218
  • Evalue 5.30e-54
ROK family protein similarity KEGG
DB: KEGG
  • Identity: 83.1
  • Coverage: 118.0
  • Bit_score: 191
  • Evalue 1.30e-46
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 98.5
  • Coverage: 135.0
  • Bit_score: 245
  • Evalue 4.30e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Burkholderiales_64_960 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 408
GTGCTGCTGGCCGAGCGGCTGCAAAGCACGGGCACGCTGACGATTGAAGACGTGGCCCAGGCCAGCCGCACGGGCGATGTGGCGGCCAACGCCATCATCCAGCGCGCGGGCAGCCTGGTGGGGCAGATGCTCGCGTCCATCGTCAACTTCTTCAACCCGTCGCATGTGTTCATTGCGGGGCGGGTGACGGACATGGGGCCGCTGTTCCTCGCGTCGGTGCGGCAGAGCGTGTACCACCGGTCGCTGGCGCTCTCTACGCGGCACCTGGAGATTCAATACGCGCCGCTGGCCGACGATGCCGGTGTGGTGGGTGCGGGTGTGCTGGCGATGCAGGAAAGCCTGTCACGCGCGGGCTCGGTGACGGGTGCGGGCGTTGGAGCAGTGGTAGGAACAGGGGCAGTGCGATGA
PROTEIN sequence
Length: 136
VLLAERLQSTGTLTIEDVAQASRTGDVAANAIIQRAGSLVGQMLASIVNFFNPSHVFIAGRVTDMGPLFLASVRQSVYHRSLALSTRHLEIQYAPLADDAGVVGAGVLAMQESLSRAGSVTGAGVGAVVGTGAVR*