ggKbase home page

SCNpilot_expt_500_bf_scaffold_25958_1

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: comp(2..1588)

Top 3 Functional Annotations

Value Algorithm Source
preprotein translocase subunit SecD n=1 Tax=Thiobacillus thioparus RepID=UPI000375B578 similarity UNIREF
DB: UNIREF100
  • Identity: 91.3
  • Coverage: 543.0
  • Bit_score: 951
  • Evalue 4.40e-274
preprotein translocase protein SecD; K03072 preprotein translocase subunit SecD similarity KEGG
DB: KEGG
  • Identity: 82.7
  • Coverage: 543.0
  • Bit_score: 877
  • Evalue 2.60e-252
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 543.0
  • Bit_score: 877
  • Evalue 1.10e-251

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1587
ATGAACCGCTTCCCGCTCTGGAAATATGTACTCATCGGCATTACGCTGGTGATCGCCTTCCTCTATACCCTGCCCAATTTCTTCGGCGAAGTACCTGCGGTGCAGATTTCCCCCGTCCGCACGACCGAAAAGGTCGACACAGCATTGCTGAGCCAGGTGGAATCCTCGCTGAAGGCCGCCAATCTGGGCTATCAGGGAGTGGAGCTGGCGGGAAACAGCATCAAGGTCCGCCTGGCCAGTACCGACCAACAGATCAAGGCCAAGGACGTGCTGCAGAACAGCCTGGGGGAACGCTATACCGTCGCGCTCAACCTGGTATCGGCTTCGCCTGCATGGCTGTCGACGATACACGCGCTGCCGATGTATCTGGGCCTGGATTTGCGCGGCGGCGTGCATTTCCTGCTCGAGGTCGACATGAAAGCCGCGCTGGAAAAAGCGGCCATCCGCTACCAGAACGATTTCCGCACCGAGCTGCGCGGTGACAAGATCCGCTACGGTCGCATCAGCCGCGAAGGCAACGCCGTGACCGTACACTTCGCCACCCGTGACCAGCGTGATGCGGCCATCAGCAAGCTGGGAACCACATTCACCGACCTCGCCTTCACTACCGATGACCAGGCCGAGGGCTTCACCCTGACCGCGCGCCTGAAACCGCAGGCCGAAACCCAGGTGCAGGAATTTGCCCTGCAGCAGAACATCACCACGCTCAGAAACCGCGTCAACGAACTCGGCGTGGCCGAGCCCGTCATCCAGCAGCAGGGCGCCAGCCGCGTCGTGGTGCAGCTCCCTGGCGTGCAGGACACCGCCAAGGCAAAAGACATTCTGGGCCGCACGGCCACGCTGGAAATCCGCATGGTCGACGAACAGGCCGACCCGACCGCCATTCAGCAGGGACAGGCTCCGTTTGGCGACGACATCGTATCCAGCCGCGACGGCGGGAAAATCGCTGTGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAACCTGGATGGCAAGGGCGCACGCATCTTCAAGGATGTGACGCGCGAAAACGTCGGCAAGCGCATGGCCATCCTGCTGATCGAGAAAGGTGTGGCCGAGGCCATCACGTCGCCGGTCATTCGCGAGGAAATCGGCGGCGGCCGCGTGCAGATCACCGGCATGGAATCCGCCCAGGAAGCCTCCGACGTCGCCCTGCTGCTGCGCGCCGGCGCGCTGGCCGCGCCGATGCAGATCGTGGAAGAACGCACCGTCGGCCCGAGCATGGGCGCGGAAAACATCAGCAAGGGCTTCCACTCCAACCTGTGGGGCTTCCTCGCCGTCACGGTGTTCATGGTGGTCTACTACCGCATCTTCGGGTTGTTCTCCTCGATCGCGCTCGCGGTCAACGGCTTTTTCCTGGTCGCCCTGCTGTCGATGCTTCAAGCCACGCTGACCCTGCCCGGCCTGGCCGGTATCGCGCTTACGCTCGGCATGGCGATCGACGCCAACGTACTGATCAACGAGCGCATCCGCGAGGAACTACGCAACGGCGCCACGCCACAGGCTGCGATCCACGCCGGCTACGACCGCGCCTGGGGCACCATTCTCGAC
PROTEIN sequence
Length: 529
MNRFPLWKYVLIGITLVIAFLYTLPNFFGEVPAVQISPVRTTEKVDTALLSQVESSLKAANLGYQGVELAGNSIKVRLASTDQQIKAKDVLQNSLGERYTVALNLVSASPAWLSTIHALPMYLGLDLRGGVHFLLEVDMKAALEKAAIRYQNDFRTELRGDKIRYGRISREGNAVTVHFATRDQRDAAISKLGTTFTDLAFTTDDQAEGFTLTARLKPQAETQVQEFALQQNITTLRNRVNELGVAEPVIQQQGASRVVVQLPGVQDTAKAKDILGRTATLEIRMVDEQADPTAIQQGQAPFGDDIVSSRDGGKIAVKXXXXXXXXXXXXXXNLDGKGARIFKDVTRENVGKRMAILLIEKGVAEAITSPVIREEIGGGRVQITGMESAQEASDVALLLRAGALAAPMQIVEERTVGPSMGAENISKGFHSNLWGFLAVTVFMVVYYRIFGLFSSIALAVNGFFLVALLSMLQATLTLPGLAGIALTLGMAIDANVLINERIREELRNGATPQAAIHAGYDRAWGTILD