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SCNpilot_expt_500_bf_scaffold_28770_5

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: 4094..5083

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXS1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 330.0
  • Bit_score: 640
  • Evalue 8.00e-181
RNA polymerase, sigma 70 subunit, RpoD similarity KEGG
DB: KEGG
  • Identity: 98.8
  • Coverage: 330.0
  • Bit_score: 640
  • Evalue 3.30e-181
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 330.0
  • Bit_score: 640
  • Evalue 1.10e-180

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 990
ATGGCCGAGGAGTTCCTCAAGCTCAAGCTGCCCAGCGCCCTGATCGACGGCTTCGTGCGCAAGCTGCGCGAGGTGGTGGGCGACATCCGCCACCACGAGCGCGTGCTGCTGGACATCTTCGTCAAGCAGGTGAAGATGCCCAAGGCCGAGTTCATCAAGGCGTTTCCCAGCAACGAGGGCAACCTCGAGTGGGTCGCCGAGCTCAGCCGCAAGCGGCAGAAGTGGTCGCCGAACATCAAGACCTACCGCGAGGCGATCGACGCCGAGCAGGAGAAGCTGGCCGCGATCGAGCGCAAGCTGTTCCTGCCGCTGATCGACATCAAGGACATCAACCGCGCCATGGCCTCGGGCGAGGCCAAGGCCCGGCGCGCCAAGAAGGAAATGGTCGAGGCGAACCTGCGCCTGGTGATCTCGATCGCCAAGAAGTACACCAACCGCGGCCTGCAGTTCCTCGACCTGATCCAGGAAGGCAACATCGGCCTGATGAAGGCGGTGGACAAGTTCGAATACCGCCGCGGCTACAAGTTCTCGACCTACGCCACCTGGTGGATCCGCCAGGCGATCACCCGTTCGATCGCCGACCAGGCACGCACCATCCGCATCCCGGTGCACATGATCGAGACGATCAACAAGTTGAACCGCATTTCCCGCCAGATGCTGCAGCAGTTCGGCCGCGAGGCGACGCCGGAGGAACTGGCCAAGGAAATGGAGATGCCCGAGGACAAGATCCGCAAGGTGCTGAAGATCGCGAAGGAACCGATCTCGATGGAAACCCCGATCGGCGACGACGAGGATTCCCACCTGGGCGACTTCATCGAGGACGGCAACGCCAGCTCGCCGATCGATTCGGCGACGGAAACCGGCCTGATGGAAACCGTGCGCGACGTGCTCGCCGGGCTCACCCCGCGGGAGGCCAAGGTGCTGCGCATGCGCTTCGGCATCGACATGAACACCGACCACACCCTGGAAGAGGTCGGCAAGCAGTTCGAC
PROTEIN sequence
Length: 330
MAEEFLKLKLPSALIDGFVRKLREVVGDIRHHERVLLDIFVKQVKMPKAEFIKAFPSNEGNLEWVAELSRKRQKWSPNIKTYREAIDAEQEKLAAIERKLFLPLIDIKDINRAMASGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQQFGREATPEELAKEMEMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDGNASSPIDSATETGLMETVRDVLAGLTPREAKVLRMRFGIDMNTDHTLEEVGKQFD