ggKbase home page

SCNpilot_expt_500_bf_scaffold_30481_1

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: comp(129..1112)

Top 3 Functional Annotations

Value Algorithm Source
transposase n=1 Tax=Variovorax paradoxus RepID=UPI000361FB87 similarity UNIREF
DB: UNIREF100
  • Identity: 70.0
  • Coverage: 327.0
  • Bit_score: 462
  • Evalue 5.00e-127
Transposase IS4 family protein {ECO:0000313|EMBL:EQD69447.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 322.0
  • Bit_score: 461
  • Evalue 9.30e-127
putative transposase, IS4 family similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 327.0
  • Bit_score: 445
  • Evalue 1.50e-122

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 984
ATGTCGCAGATGAGCTTCGGTGATTCGGAGTACGCGAGCAAGCGCAAACGGACACGTCGCGAGATTTTTCTGGCGGAAATGGATCAGGTCATCCCGTGGACGATCCTTCTGAACCTGATCGAGCCGGTCTACCCGAAGGCAGGCAACGGCCGGCCGCCGTATCCGTTGAAGGTCATGCTCAAGGTTCACCTGATGCAGAACTGGTTCGGGTTGAGCGATCCGGCGATGGAAGAAGCGCTGTATGAGATTGGGTCGATGCGGCAGTTTGCCGGGCTTTCGTTGACCAAGCCGATCCCGGACGAAACGACGATCCTGAACTTCCGTCGGTTGCTGGAGAAGTATGAACTGGCGGCGGAGATACTGTCGCGCGTGAACGGCTATTTGACGCGCAAGGGTCTGATGCTCAAGCGCGGAACGATCGTGGACGCGACGATCATCGCGGCGCCGAGTTCGACGAAGAATGCCGACGGCGAGCGCGATCCGGAGATGCATCAGACAAAGAAGGGCGAGCAGTGGTACTTCGGCATGAAGGCGCATATCGGCGTGGATGTCGACTCAGGCTTGGTACACACGGTAACGACGACGCCGGCCAACGAGGCGGATGTGAACGAGGCGGAGCATTTGCTGCACGGGAAAGAAAGTGTCGTGCATGCCGATGCGGGCTACACCGGTGCGGACAAGAGTGCGGCGCGCAAGGGTTTGGAGTGGCAGATCGCACGCAAGCGCGGCAGCGTGAAAGCGTTGCCGGAAGGGCGTGAGAAGCGGGCGATCGAGAAGCAGGAGAAGTGCAAGGCAAGCATTCGTGCACGCGTGGAGCATCCGTTCCGCGTGCTGAAGTGCCAGTTCGGTTATGCAAAGGTGCGCTTCAAGGGACTGGCAAAGAACACCGCGCAGATTCTGACGTTGTTCGCACTGTCGAATCTGTGGATGGCTCGAAAGCGGTTATTGGCGATGACAGGACAGTTGCGCCCAATGACCGCGTAA
PROTEIN sequence
Length: 328
MSQMSFGDSEYASKRKRTRREIFLAEMDQVIPWTILLNLIEPVYPKAGNGRPPYPLKVMLKVHLMQNWFGLSDPAMEEALYEIGSMRQFAGLSLTKPIPDETTILNFRRLLEKYELAAEILSRVNGYLTRKGLMLKRGTIVDATIIAAPSSTKNADGERDPEMHQTKKGEQWYFGMKAHIGVDVDSGLVHTVTTTPANEADVNEAEHLLHGKESVVHADAGYTGADKSAARKGLEWQIARKRGSVKALPEGREKRAIEKQEKCKASIRARVEHPFRVLKCQFGYAKVRFKGLAKNTAQILTLFALSNLWMARKRLLAMTGQLRPMTA*