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SCNpilot_expt_500_bf_scaffold_31545_1

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: comp(2..1117)

Top 3 Functional Annotations

Value Algorithm Source
Lipid A export ATP-binding/permease protein MsbA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9W3_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 58.9
  • Coverage: 372.0
  • Bit_score: 431
  • Evalue 1.10e-117
ABC-type multidrug transport system, ATPase and pe rmease components {ECO:0000313|EMBL:CDP50277.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.8
  • Coverage: 372.0
  • Bit_score: 532
  • Evalue 4.80e-148
lipid A export ATP-binding/permease protein MsbA; K06147 ATP-binding cassette, subfamily B, bacterial similarity KEGG
DB: KEGG
  • Identity: 58.9
  • Coverage: 372.0
  • Bit_score: 431
  • Evalue 3.40e-118

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Taxonomy

Devosia sp. DDB001 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1116
CGCTTCTATTTCATCTCGGTGCTCGGGGAGCGCGTGCTCACCGACCTGCGGCGCAAGGTGTTCGACCACCTGCTGATCCTCGATTCGCGCTTCTTCGACCTGCATCGGGTGGGCGAGCTGACCTCGCGTCTCACCGGAGATGTCGCCACCATCCGCGGCGCCATCGGCTCGAGCATCTCGGTGATGCTGCGCGGCTCGGTGACGCTCATCGGCGCCGTGGTGCTGATGTTCATCACCAGCCCGGTGCTCGCCTCGGTGGTGGTCTTGGTGGGCCCGGCGATCCTGATCCCGGTGATGGTCTTCGCCCGACGCCTGAGGTCGAAATCGCGGCGCACGCAGGACGCATTGGCGGACATGTCGGCGATGGCGACCGAAGCGCTCGGCGCCAGCAAGACGATCAAGAGCTTCGTGCAGGAGACCGAGCAGTCGAGCGCGTACGGCGTCGAGGCCGAAAAGTCCTACCGGTCGGAGGTGAGCCGGCTGTGGACGCGTGCGGCCCTGCTGGGCGGCGTGGTGTTCCTGTCAACCGCCGCGCTCGTCGTGCTCGTCTGGTGGGGCGCGAACGCGGTGTTCCAGGGCTGGGTCACGGTGGGGGGGCTGGCGCAGTTCATGATCTACGCGCTGATGGCGTCGAATGCGCTGACCAACCTTTCCGACATCGTGGGGGTGTTCCAGATCGTCGCGGGGGCGACCGAGCGGCTGATGGAGATCCTCGATACCGAACCGGCGATCAAGGCTCCGGCGCAGCCCAGGGCGCTGCCTCAGCCGGCGCTGGGGACGGTGGCCCTGGAGAATGTCGACTTCTGCTATGGTACGCGCGACGACGAGCCGGTGCTGGACAAGGTGAGCTTTGCCGTCGTCCACGGGGAGACGGTGGCGCTGGTTGGCGCCTCGGGGGCCGGCAAGTCGACGATCTTCGCGCTGGTGCAGCGGTTCTACGACGTGACCGGCGGGCGCATCCTCGTCGATGGCCTCGACGTGCGCGACGTTGATCCGGCGCAGCTCCGGCGGCGTTTCGCCTATGTCGAGCAGGAGCCGACGATCTTTGCCGGCACGATTGCCGACAACATCCGCTTCGGCCGGCCGGAGGCGAGCTTCGCCGAGATCGAGGCGGCT
PROTEIN sequence
Length: 372
RFYFISVLGERVLTDLRRKVFDHLLILDSRFFDLHRVGELTSRLTGDVATIRGAIGSSISVMLRGSVTLIGAVVLMFITSPVLASVVVLVGPAILIPVMVFARRLRSKSRRTQDALADMSAMATEALGASKTIKSFVQETEQSSAYGVEAEKSYRSEVSRLWTRAALLGGVVFLSTAALVVLVWWGANAVFQGWVTVGGLAQFMIYALMASNALTNLSDIVGVFQIVAGATERLMEILDTEPAIKAPAQPRALPQPALGTVALENVDFCYGTRDDEPVLDKVSFAVVHGETVALVGASGAGKSTIFALVQRFYDVTGGRILVDGLDVRDVDPAQLRRRFAYVEQEPTIFAGTIADNIRFGRPEASFAEIEAA