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SCNpilot_expt_500_bf_scaffold_43750_2

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: comp(338..1204)

Top 3 Functional Annotations

Value Algorithm Source
TRAP-type C4-dicarboxylate transport system, periplasmic component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZC7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 61.6
  • Coverage: 232.0
  • Bit_score: 300
  • Evalue 1.70e-78
C4-dicarboxylate ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETR78103.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.4
  • Coverage: 232.0
  • Bit_score: 301
  • Evalue 1.10e-78
TRAP dicarboxylate transporter similarity KEGG
DB: KEGG
  • Identity: 58.6
  • Coverage: 232.0
  • Bit_score: 276
  • Evalue 1.10e-71

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Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 867
CTGCTGATGTCCAACCTGGAGAACGAAAGCCCGATCTTCGGCGCCGACGTCGTGCCCTTCCTCGCCTCGTCCTACGCCGAGTCGAAGAAGCTGTACCAGGCACAGAAGCCGTTCGTGCAGAAGAAGCTCGAGGCCCAGGGCATGATGCTGCTCTTCGCCGTGCCGTGGCCGCCGCAGGGCTTCTACGCCAAGAAGGACATCAACAGCGTCGCCGACCTGAAGGGCCTGAAGTTCCGTGCCTACAATGTCGGCACGACGCGGCTCGCCGAGCTTGCCGGCATGGTGCCCGTCACCATCCAGGCGGCCGACCTCGCCCAGGCGCTGGCCACCGGTGTCGTCAACTCCTTCATCTCCTCCGGCTCGACCGGCTACGACAGCAAGGTGTGGGAATCTCTGACGCATTTCTACGACACCAAGGCCTGGCTGCCGAAGAACATGGTGGTCGTGAACAAGGAGGCCTTCGGCAAGCTCGACAAGGCCCAGCAGGAGGCGATCCTCAAGGCCGCCGCCGACGCCGAAGTGCGCGGCTGGAAGCTCTGCGAGGAGAAGACCGGCTGGTATGTTGACCAGCTCAAGGCCAAGGGCATGAAGACCCTGGAGCCGTCGGCCGAGCTGATGACCGGGCTGAAGCCAGCAGCTCATCGAAGCCTACCGGAAGCAGTAAGCGTTGCGACGCTTTCTCGACGCGCTGTACTGGGTCTGCGGCGCACTCGCCGGGTTGATGCTGGTCGCCATCTGCATCGTCATGATGCTGATGTCGGTCGGCCGAGAGGTCGGCATCAACCTCAAGGGCGGCGACGAGATCGCAGGCTGGCTGTGTGCCGCCATGTGCTTCCTCGGCCTCGCCCACACCTTCAAGCACGGTGA
PROTEIN sequence
Length: 289
LLMSNLENESPIFGADVVPFLASSYAESKKLYQAQKPFVQKKLEAQGMMLLFAVPWPPQGFYAKKDINSVADLKGLKFRAYNVGTTRLAELAGMVPVTIQAADLAQALATGVVNSFISSGSTGYDSKVWESLTHFYDTKAWLPKNMVVVNKEAFGKLDKAQQEAILKAAADAEVRGWKLCEEKTGWYVDQLKAKGMKTLEPSAELMTGLKPAAHRSLPEAVSVATLSRRAVLGLRRTRRVDAGRHLHRHDADVGRPRGRHQPQGRRRDRRLAVCRHVLPRPRPHLQAR*