ggKbase home page

SCNpilot_expt_500_bf_scaffold_36973_3

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: comp(830..1561)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.6
  • Coverage: 229.0
  • Bit_score: 253
  • Evalue 2.20e-64
signal transduction histidine kinase regulating C4-dicarboxylate transport system; K10125 two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 229.0
  • Bit_score: 213
  • Evalue 9.60e-53
Signal transduction histidine kinase regulating C4-dicarboxylate transport system n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCQ3_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 49.3
  • Coverage: 229.0
  • Bit_score: 213
  • Evalue 3.00e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 732
GCGGCACTGGCCAGCGTCTCCAATGACGAACGCGACGGCGCCATCATCGGCGGTACGATCTCGGCGCTTCTGCTATCGCTGCTTCTCTACATGCTTCAGCGTCACCGCGCCTACCTCTCCGAGCGGGACGCCGGCATAAAGCTCAAGCAGGAGGTGGACGAGCGCACGCGGGAGCTGCGGGACGCAAACACCTCTCTGACGACGGAGGTGGACGAGCGCCGGCGTACGGAGGCGCGCCTGCGCACGACGCAGAACGCGCTTGTCCAGGCCGGAAAGCTCGCAGCACTCGGACGCATGTCCGCCGCACTGGCCCATGAGATCAACCAGCCGCTCGCAGCAATCCAGACCTTCATTGCCAGCACACGGATTTTCGCCCAGCGCGGCGATACGGATCAGGTCATGCGCAACGTGGACCTCATCAGCGACCTCGCCGATCGCATGGCGAAGCTTTCCGGGCACCTGAAGATGTTCGCCCGCAAGAGCGAGCCCACCCATCACGAGCGCGTCCGTGTGGACCGGATCCTGGACGGGGCGCTGCTCCTCGTCGAGAACCGGATCAATTCCGGCGACGTGCGGGTCGAGAAGGACATCGAGCCAGACCTGGTCGTGGTCGGCCACGCCGTGCAGCTCGAGCAGGTCGTCGTGAACCTTCTTCTCAATGCCCTCGATGCCGTGTCGGATGCGACGAGCCCCTGGCCGACCTCCTCGAGCGGATTTTCGACCCGTTCGTGA
PROTEIN sequence
Length: 244
AALASVSNDERDGAIIGGTISALLLSLLLYMLQRHRAYLSERDAGIKLKQEVDERTRELRDANTSLTTEVDERRRTEARLRTTQNALVQAGKLAALGRMSAALAHEINQPLAAIQTFIASTRIFAQRGDTDQVMRNVDLISDLADRMAKLSGHLKMFARKSEPTHHERVRVDRILDGALLLVENRINSGDVRVEKDIEPDLVVVGHAVQLEQVVVNLLLNALDAVSDATSPWPTSSSGFSTRS*