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SCNpilot_expt_500_bf_scaffold_5818_2

Organism: SCNPILOT_CONT_300_BF_Novosphingobium_63_714

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(1190..1681)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZCV0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 90.2
  • Coverage: 163.0
  • Bit_score: 295
  • Evalue 2.40e-77
Transcriptional regulator, XRE family protein {ECO:0000313|EMBL:EGD57564.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.2
  • Coverage: 163.0
  • Bit_score: 295
  • Evalue 3.40e-77
putative DNA-binding protein; K13655 HTH-type transcriptional regulator / antitoxin for MqsR toxin similarity KEGG
DB: KEGG
  • Identity: 66.1
  • Coverage: 165.0
  • Bit_score: 207
  • Evalue 4.60e-51

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Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 492
ATGAGCGAGACGCGAATTCACCCCGAGACGGGTCAGGAACTACGCCGCGACACACGCCCGCAGAAGGTGTGCGTCGGCTCGCTCTCGCGCGTCGTCGACGTGCCGGGCTGGTATCCCGAAGGCGATGGCGATGCCATTCACAGCGGTGCAGATTTGCGCGCCTACAACGACGCGTTCAAGGAACTGCGCGAGGCCTATGCAGCCCGCATCAAGACTGTTCGGAAAAAACTCGGCCTGACCCAGGAAGAAGCCGGCGTTATCATTGGTGGCGGCAAGCGGGCTTTCCAGAAGTATGAAAGCGGCCGCACGCCGCCAAGCGACGCGGCAGTGGGCCTCATCGAAATCCTAGCCCGTCATCCCGAGGAGGTCGCAACTCTGCGGTCGTTCCGCATGGGGACACCAAAGGCGATGCCGCCGGATCCGCGCTCGTCGGGTGCGCCCTCCCCTATCGGCAAGCGCATCAAGCGCGGTGTTCGCAACGCCGCAGCTTGA
PROTEIN sequence
Length: 164
MSETRIHPETGQELRRDTRPQKVCVGSLSRVVDVPGWYPEGDGDAIHSGADLRAYNDAFKELREAYAARIKTVRKKLGLTQEEAGVIIGGGKRAFQKYESGRTPPSDAAVGLIEILARHPEEVATLRSFRMGTPKAMPPDPRSSGAPSPIGKRIKRGVRNAAA*